Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi58g00074 ATGGGAAACAGTGAGGATGGGAAATCTGTTAAGACTGAAAAGCCTGCTTCACCTGTAACAACTGATCAGACCAATCAGGCCAACCAGCCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGGCATATTATGGGCCAAGAGTCAATGTTCCACCATATTTCAACTCAGCTGTCGCTTCCGGTCACGCTCCTCATCCATACATGTGGGGGCCACCACAGGTAGTACCCCAAAGATTCATTTACTTTATTTTACCATTAATATTTCTGTTTTTTTGGATGTACGTGGTGGGAATGAATAATATGCCAACTTATTGTCTCTTCCAGCCTATGATGCCACCATATGGGCCGCCTTATGCAGCATTTTATTCACATGGAGGGGTTTATACTCACCCTGCAGTTGCTATCGGGCCAAATTCACATGGTCAAGGAATTCCATCTTCACCTGCTGCTGGGACTCCTTCAAGTGTAGAGACACCAACCAAATTATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGGATTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCTGAGAATGCTGAGCGTGGAGCTGAAAATAGGCTGTCAAAGAGTATGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTGCAGGGACCAATCAAACAAGGAAACGAAGCCGTGAAGGAACGCCGACCACTGATGGAGAAGGGAAAACTGAGACACAAGACAGTCCAGTTTCCAAAGAGACTGCAGCTTCCCAACAGATGGTGTCAGTTACCCCAGTCAGTGTTGCAGGAAAATTAGTTGGACCTGTAGTTTCTTCAGGTATGACTACAGCACTAGAGCTGAGGAACCCTTCGACTGTTCATTCTAAGACATGTTCTACTGGTGCCCCACAACCTTGTGCAGTTTTGCCTTCTGAAGCTTGGATGCAGAATGAACGTGAGCTGAAACGTGAGAGAAGGAAACAATCAAACCGCGAATCTGCTAGAAGGTCTAGGCTGAGGAAGCAGGCTGAGACTGAAGAATTGGCACGAAAAGTTGATGGTTTGACTGCTGAGAATATGACACTGAAATCAGAAATAAATCAATTGACTGAAAATTCTGAGAAGCTGAGGATGGAAAATGCTGCATTAAGGGAAAAACTGAAAAATACTCAACTGGGTCAACCGGAAGAGATAATTTTGAACAACATTGAGAGCAAGAGGACTGCACCTGTAAGTACAGAAAACTTACTATCAAGAGTGAATAATTCCAGTTCTAATGATAGAACTGGAGAGGAAGAGAATGATTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTGATGCTGTAGCAGCTGGTTGA 1386 0.4394 MGNSEDGKSVKTEKPASPVTTDQTNQANQPNIHVYPDWAAMQAYYGPRVNVPPYFNSAVASGHAPHPYMWGPPQVVPQRFIYFILPLIFLFFWMYVVGMNNMPTYCLFQPMMPPYGPPYAAFYSHGGVYTHPAVAIGPNSHGQGIPSSPAAGTPSSVETPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAENAERGAENRLSKSMDTEGSSDGSDGNTAGTNQTRKRSREGTPTTDGEGKTETQDSPVSKETAASQQMVSVTPVSVAGKLVGPVVSSGMTTALELRNPSTVHSKTCSTGAPQPCAVLPSEAWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVDGLTAENMTLKSEINQLTENSEKLRMENAALREKLKNTQLGQPEEIILNNIESKRTAPVSTENLLSRVNNSSSNDRTGEEENDFCENKPNSGAKLHQLLDTNPRADAVAAG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi58g00074 461 Pfam G-box binding protein MFMR 1 78 IPR012900 -
Sebi58g00074 461 Gene3D - 319 372 - -
Sebi58g00074 461 SMART brlzneu 316 380 IPR004827 GO:0003700|GO:0006355
Sebi58g00074 461 MobiDBLite consensus disorder prediction 1 29 - -
Sebi58g00074 461 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 318 381 IPR004827 GO:0003700|GO:0006355
Sebi58g00074 461 MobiDBLite consensus disorder prediction 203 228 - -
Sebi58g00074 461 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 323 338 IPR004827 GO:0003700|GO:0006355
Sebi58g00074 461 MobiDBLite consensus disorder prediction 141 168 - -
Sebi58g00074 461 Coils Coil 343 384 - -
Sebi58g00074 461 MobiDBLite consensus disorder prediction 237 259 - -
Sebi58g00074 461 FunFam G-box binding factor 3 319 374 - -
Sebi58g00074 461 MobiDBLite consensus disorder prediction 320 343 - -
Sebi58g00074 461 CDD bZIP_plant_GBF1 321 369 IPR045314 GO:0003700|GO:0006355
Sebi58g00074 461 Pfam bZIP transcription factor 316 378 IPR004827 GO:0003700|GO:0006355
Sebi58g00074 461 Pfam Disordered region downstream of MFMR 168 295 - -
Sebi58g00074 461 MobiDBLite consensus disorder prediction 194 259 - -
Sebi58g00074 461 SUPERFAMILY Leucine zipper domain 319 375 IPR046347 GO:0003700|GO:0006355
Sebi58g00074 461 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 76 IPR044827 GO:0003700|GO:0006355|GO:0043565
Sebi58g00074 461 MobiDBLite consensus disorder prediction 410 461 - -
Sebi58g00074 461 MobiDBLite consensus disorder prediction 139 170 - -
Sebi58g00074 461 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi58g00074 Sebi-Chr58 1193337 1197748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi58g00074 1 461 bZIP Transcription Factor Family AT2G46270 47.222 1.74e-110 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi58g00074 MFMR_assoc 1.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi58g00074 K09060 - gmx:547789 679.478