Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi58g00034 ATGTTTGATCTAGAAAACACCAACCATGAGCTGAAAAGTGATCTGAAAGATTTATACATAAATTCAGCAGTCCAAATTGATGTTTCTGGCAACCGCAAGGCTGTGGTTATCCATGTCCCGTACAGATTAAGGAAAGGTTTCCGCAAGATTCATGTCAGGCTTGTTAGGGAGCTTGAGAAGAAATTTAGCGGCAAGGATGTAATCTTGGTTGCCACCCGGAGGATATTGAGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGTCCCCGCACCCGTACACTCACTGCTGTGCACGAGGCAATGCTGGAGGACATTGTATTGCCTGCTGAGATTGTTGGGAAGCGTGTTAGGTATCGAATTGATGGATCCAAGATTATGAAGGTGTTTTTGGACCCCAAGGAGCGAAACAATACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAATTTCAGGCAAAGATGTTGTGTTTGAGTATCTAA 483 0.4431 MFDLENTNHELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILVATRRILRPPKKGSAVQRPRTRTLTAVHEAMLEDIVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKFQAKMLCLSI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi58g00034 160 ProSitePatterns Ribosomal protein S7e signature. 53 66 IPR000554 GO:0003735|GO:0005840|GO:0006412
Sebi58g00034 160 PANTHER 40S RIBOSOMAL PROTEIN S7 1 154 IPR000554 GO:0003735|GO:0005840|GO:0006412
Sebi58g00034 160 Pfam Ribosomal protein S7e 1 155 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi58g00034 Sebi-Chr58 578151 579277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi58g00034 1 154 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 79.870 2.98e-93 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi58g00034 K02993 - gmx:100499757 291.582