Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi58g00010 ATGGAGCAACATTTGCATTGCGCCGCCGAAGATGACGTGGCAGCATCATCCGCAGCCTCATCCACTACCACTAGCTCAGCCGTGAAATCCGGTAACGAACGCGGCGGCACGCGCCACCCTGTCTACCGCGGCGTCCGGAAGCGGCGATGGGGAAAATGGGTTTCGGAAATTCGGGAGCCTCGGAAGAAGTCGCGCATATGGCTTGGGTCTTTTCCGGCGCCGGAGATGGCGGCGAAGGCTTACGACGTCGCCGCCTACTGTCTCAAGGGAAGAAAGGCGCAGCTCAATTTCCCCCGACGAGAGGCGGCGGCTAAGGCGGCTCGCATGATGGTCAAGGCCGCTGCCGTCGACTCGCCGGAGAAGAGCAGCATTGGTTCCGATGGCGACAGCGGCGGCGACGATTTTTGGGGCGAGATAGAGCTGCCGGAGCTCATGAACAGCACGTGGTGGACTTCCTCCGCTGACATCACGCCGTGGCCGGAAGTTGAGCTTCCGCCGCAGCAACCCTTCACGGCGTGCCTATAG 525 0.621 MEQHLHCAAEDDVAASSAASSTTTSSAVKSGNERGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPAPEMAAKAYDVAAYCLKGRKAQLNFPRREAAAKAARMMVKAAAVDSPEKSSIGSDGDSGGDDFWGEIELPELMNSTWWTSSADITPWPEVELPPQQPFTACL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi58g00010 174 Pfam AP2 domain 40 90 IPR001471 GO:0003700|GO:0006355
Sebi58g00010 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 117 - -
Sebi58g00010 174 MobiDBLite consensus disorder prediction 1 42 - -
Sebi58g00010 174 Gene3D AP2/ERF domain 41 101 IPR036955 GO:0003700|GO:0006355
Sebi58g00010 174 PRINTS Ethylene responsive element binding protein signature 80 100 IPR001471 GO:0003700|GO:0006355
Sebi58g00010 174 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Sebi58g00010 174 FunFam Ethylene-responsive transcription factor 2 40 99 - -
Sebi58g00010 174 MobiDBLite consensus disorder prediction 15 32 - -
Sebi58g00010 174 SUPERFAMILY DNA-binding domain 41 99 IPR016177 GO:0003677
Sebi58g00010 174 CDD AP2 42 98 IPR001471 GO:0003700|GO:0006355
Sebi58g00010 174 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Sebi58g00010 174 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi58g00010 Sebi-Chr58 221752 222334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi58g00010 22 147 AP2-EREBP Transcription Factor Family AT1G01250 58.621 3.41e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi58g00010 AP2 1.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi58g00010 K09286 - gmx:100802845 223.016