Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi589g00014 ATGGCAGTTGTTCAAGCAAACAATTTGTTGGAGGATCAAAGCCAACTTGAATCAGGCCCCATAAGCTCACATGCAGGAAGTCCTCAAGGAACTTTTGTTGGTATATATGATGGGCATGGAGGTCCAGAAGCTTCCCGGTTTGTCAATGACCACCTATTTAAAAATATCAAGAAATTCACTTCAGAAAATCAAGGAATGTCAGCTGATGTTATCAACAAAGCATTCTTGGGAACAGAAGAAGAGTTCCTTTCTCTTGTAAAGAAGCAGTGGCTACACAAGCCTCAGATTGCGTCGGTTGGATCTTGCTGTTTGATAGGCATAATATATAGCGGGGAGCTCTATATTGCTAATGCAGGAGACTCTCGAGCTGTGTTAGGTAGAATGGATGAGGCTACGAAAGAGGTTAAAGCAATTCAACTATCCTCTGAGCATAATGCTAGCCTGGAATCTGTCAGAGAAGAGTTGCGCTCATTGCATCCTGATGATCCGCAGATTGTAGTGATGAAGCACAAAGTCTGGCGAGTGAAGGGTCTGATTCAGGTTTCAAGATCCATTGGTGATGCCTATCTAAAGAAGGCAGAGTTTAACAAAGCACCACTATTGGCCAAGTTTCGACTCTCAGAACCCTTTGAGCAGCCAATCCTTAAAGCTGAACCAACAGTACTAGTACAGAAACTCCGTCCTCAAGATCATTTTCTTATATTTGCATCAGATGGGTTATGGGAGCATGTGAGCAATCAAGAAGCAGTTGACATTGTTCATAACTATCCACGTAATGGAGTAGCGAAGAAACTTATCAAAAACTGCACTATGTGCAGCTGCAAAGAAAAGAGAGATGAGATTCTCAGACTTGAAAAAGATTGA 864 0.4213 MAVVQANNLLEDQSQLESGPISSHAGSPQGTFVGIYDGHGGPEASRFVNDHLFKNIKKFTSENQGMSADVINKAFLGTEEEFLSLVKKQWLHKPQIASVGSCCLIGIIYSGELYIANAGDSRAVLGRMDEATKEVKAIQLSSEHNASLESVREELRSLHPDDPQIVVMKHKVWRVKGLIQVSRSIGDAYLKKAEFNKAPLLAKFRLSEPFEQPILKAEPTVLVQKLRPQDHFLIFASDGLWEHVSNQEAVDIVHNYPRNGVAKKLIKNCTMCSCKEKRDEILRLEKD 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi589g00014 287 CDD PP2Cc 26 269 IPR001932 -
Sebi589g00014 287 Gene3D - 1 286 IPR036457 -
Sebi589g00014 287 ProSiteProfiles PPM-type phosphatase domain profile. 1 287 IPR001932 -
Sebi589g00014 287 SMART PP2C_4 13 284 IPR001932 -
Sebi589g00014 287 Coils Coil 274 287 - -
Sebi589g00014 287 Pfam Protein phosphatase 2C 20 269 IPR001932 -
Sebi589g00014 287 PANTHER PROTEIN PHOSPHATASE 4 274 IPR015655 GO:0004722|GO:0006470
Sebi589g00014 287 SUPERFAMILY PP2C-like 26 270 IPR036457 -
Sebi589g00014 287 ProSitePatterns PPM-type phosphatase domain signature. 32 40 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi589g00014 Sebi-Chr589 129802 132197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi589g00014 1 277 PP2C-type Phosphatase Gene Family AT3G12620 74.729 2.14e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi589g00014 K01102 - gmx:100785413 464.151