Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi588g00047 ATGTGGGGAGGAGTAGTTGTAATAATTGGAAAAGATAGCCCTCAAATCAAATCACAAATCAGGTTGTACTCCTCCATCTTCTGCTGCATAGCTGTTGTAATTTTCATCTCAGGCCTCCTTCAACACTACAATTTTGCCATCATGGGAGAGAGGTTGCTAAAAAGGGTGAGAGAATTTTTGCTAGAAAAGATTTCTGTCACAGCTACACAAGCTTTTGTACTTGGTTTAATTGTTTCATGGAGGGTGACTATTATCATGATTGGTATGCAGCCTTTGATCATTGCATGTTTATACTCAAAATGCATTCTCATGAAAAGTATGTCAAGCAAAGCAAGAAGTGCCCAAAGAGAGGGTAGTCAATTAGCAATGGAAGCTACTATTAACCATAGGACTATAGCTGCATTCTCATCTGAGAAAAGGATGCTAAATTTGTTCACAACTGCTATGGAGGGCCCCAAGAAGGAAAGCATCAAGCAATCATGGATTTCAGGTTCCATATTGTCAGTGTCACAATTTATAACAACATCTATAACTTTGACTTTTTGGTATGGTGGCAGGTTATTGAATCAAGGGTTAGTGGAATCAAAACACCTTTCGCAAGTTTTCCTCATTTTGATGGGAACTGAGAAGAAAGCAAGACCACAAGAGCAATGTCCAAGGTGCAATTCAACCAACTAA 678 0.3894 MWGGVVVIIGKDSPQIKSQIRLYSSIFCCIAVVIFISGLLQHYNFAIMGERLLKRVREFLLEKISVTATQAFVLGLIVSWRVTIIMIGMQPLIIACLYSKCILMKSMSSKARSAQREGSQLAMEATINHRTIAAFSSEKRMLNLFTTAMEGPKKESIKQSWISGSILSVSQFITTSITLTFWYGGRLLNQGLVESKHLSQVFLILMGTEKKARPQEQCPRCNSTN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi588g00047 225 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 71 206 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi588g00047 225 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 66 206 IPR039421 -
Sebi588g00047 225 Gene3D ABC transporter type 1, transmembrane domain 64 206 IPR036640 GO:0005524|GO:0016020
Sebi588g00047 225 Gene3D ABC transporter type 1, transmembrane domain 1 62 IPR036640 GO:0005524|GO:0016020
Sebi588g00047 225 Pfam ABC transporter transmembrane region 71 203 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi588g00047 225 SUPERFAMILY ABC transporter transmembrane region 12 205 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi588g00047 Sebi-Chr588 595369 596601 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi588g00047 45 207 Calmodulin-binding Proteins AT2G36910 20.468 2.14e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi588g00047 K05658 - gmx:100804664 286.96