Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi588g00034 ATGGCGGAGGAGCTGCATGTGTCGCCGGCCAGCACCACGCCCCCGACTCCCAATTCAGCTCGCGACCTTTTCTACACGCCGTCGGCCTCCGCCACCACCGCCACCTGGTGCGTTCGCCCCATGGCGCATCCTGCTGCTATCGGGTTTAACTATGGTTGTGGTTTTGGCAATCGGGTTGCACCTGGTAATGCTTTGAATTTGGGCAATTGGGTTGGGGCTAATGGTTTGGACAAGGCCTGCAATGATAGTGTAGCTGTAAATGGTTATGCTTATGGTGGTGCTGTTGGGGGCACCAGACTGTGTGATGAGGCCGGGGATGATTCGGTGTCAGGGAGAAAAGTGAAGTTTTTGTGCAGTTTTGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGAGGGCAGACAAGGATCATTAGTGTTAGGAGGGATGTTAGTTTCAATGATTTGGTGCAAAAGATGGCTGAGACTTATGGGCAGCCAGTGGTTATCAAGTATCAACTCCCTGAGGAGGATCTTGATGCGCTTGTCTCTGTTTCATGCCCTGATGATGTTGAAAATATGATGGAGGAGTATGAAAAATTAGTTGAGAAGTCTCCTGATGGTTCTGCTAAGTTAAGGGTTTTTCTGTTTTCTGCCTCTGAGCTTGAACTTTCTGCTGGTGCGGTGCAATTTGGGGACTTGCAAGATACTGGCCAGAAATATTTTGATGCTGTGAATGGACTTTCGGATGGGAATGGAATTAGTGGTGGAATCAAGAGGAAGGGGAGTGTTACAAGTGCAGCTTCAACTCAGAATTCTGATTTGAGTGGGATAGATACTTTTGATCATTCAATTGCTGGTCAAGGGGAGCCAATGGCATCACCCAAGGAGAATGTGGCAGCTTCTCCAGACATAAGTGCAAATTTGGTGATGTCAGAACCCAGTACAGCAGGTACTTCTGCGGTTTCATTGGGCATGCCTGTGGCTAAGACTAGTCCAACACACACTCCATATTTCCAGAATGAGGTTGAGTTAGAAAAGTCTGTGCCTGTTACTTTATCCCAGCAGCCATTTGGATTGCAGCAATCTGGAATGGAAGTTTCACCCCATTCACCTTATTTGCAGCCTTTTGTTGATACACGCCAGGAGGTTATGAACCATGCAGATTATGTCCACCTGCCTCCCCAAATGGGGTTCCCAAATCCTCATCTTTTAGGGAAGACAGGGCATGTCTTCACACAACAGCAGTTTCATGATAATACTCCTACTAGTTTAGCATTCCATCAGGTCAACCCTGGAGCACAAATGACAATGACTCCACCATCTTCTCATGTTGGTGTAAGACCAACTGTTATTCAGCAACAACCATTGATGCAACAGCAGCAAAATCGTTTGGATCAATACAGTGATGAAAATACATCAGGGATAAGGATTATCCAGCTTCCTGCTGAACAAAGCTACAATACATATCAGGTTCCAGTGAATCAAGTCCCATCTGTCATAGTTGGAGGTAATTATGGTTGGGTTCAGGTTCCTTCACAAGAGCCTGTTGTTTTCTCTGATGGATTATTACCTCAACAACAGGTAATGATCCCTGAGAGAATCCAAAGAGCTGAGGGCTGTACTATGTGTCAGACAAAGTTACCTCATGCCCATTCCGATCCTGTGGTTCCCGATCAGCATAGTAGTGGTGCAGGTCCAGCTCCTGATTCAGGCCCAAGTTACCATAGTTTGCCTATGGAGGACATTGTAAAAGCTCAAGCAAAAAATAGGGCCAAGCCTATGGTGACAGCACCCTTGAAGGAAGGCATTATTGAACAAGGTGCTGGGACCAGACACAGGGTCATTAACAAATTTGAACCTCCTGATGGAGTACCTTATACTGATAATACTGGGCTTTCTCATAATCTTGAGCCTCAGCCTGAAGGTGGGAGGATTTTTATGCAAAAGCCAGAAGAATTTGATCATACCAGAAATTCATTTATCCAGGAAACAATTGGAAGGACAGGTGGAAAACAGTCTCCCAATGATGGGCTCAAGGCCATGGGAACATCACCACTGTCTTATCCAGATGATGGTATCCACCAGCATATGGTGCCAGGTGAAAACTGGGTTAAACAGGAGGTGCTTGTCAATAAACCTGTCAATAATGATATACCTACAGTTGAGGGAACCACTATACAAACTTCAGAGTGTATGGTTCAAGGATCTCCAAACGAATATACTAATGAGCTTATTGGTGCTGTTTCTAAATCAAATGAAGTGGATAATTGGATTAGACAGGGCCATCTAAAACCTTTTGATGGAAGGATGGACACCTTCAAGATACAAAATCCTGAAATTTATGCAAGCAATGCTCACTGTTTACTGCCAATTGATAAACACAATGGGAATGATAAATTAGATTACAAAAGTCAGCTTCCTCTAGATGAAGAGGTGATTCTGGATAACAACTTTGGCAAGTCAAAATTGATAGTTGATGCAAATCAAATTAAGATGACAGGTGTGGTGCCAAGTTCTTCTACAGAAATTTCATATGGGCACAATTATAGTTCAGGAGAATACAATGAGGTTGCACAATCCCCTATGCTGGACATTCCTTGCTCAAATCCTCAAACAAAGACTGGAAACCACCACAAGGATGATGCAGCATCATCTTTATCTTCACCATCTGTCAGGTTTGGAGATGTGCAGGATTCTCCAAATTCACTTTTCAGCAATCAGGATATCTGGAATATACAACATGGTACCTTCTTTCCTCCGGCTAGACCTAGCAATGCTGCATTGAAGAAAGAAACCTATTCTCATATGGATTACTTTGGTGAGAATCCAGGCAACTGCGGGAAAAAAAATTTAGAAGCACAATTGGATGATGGCCTCTACCAGTCATTCAAACAGAATTTAACTTTTGAACAAGGTCGGTCTGGCAAAGGCTCAACAGAAGACCAACAACTTCAAGCTGTTGCTGAAGATGTAGCAGCTTCTGTTCTGCACCCATGTACTCCTCCAAATCCTAACTTGCATGCCAGAGATGTTTCCTGTCGTGAAAACATTGAGGATGACGATGTTCAAAATAATCTAATAGATGATGTCAAGAGCAAGCCACCAGAAAAGGCAAATTTTGGCTTTCCGGCAGCAGTTGGTGTTGGACGATTGCAGGTTATAAAGAACTGTGACCTTGAAGAGCTGTCAGAATTGGGTTCTGGTACTTTTGGGACTGTTTATCATGGAAAATGGAAGGGATCTGATGTTGCAATCAAGCGAATTACTGATAGGTGTTTTTCTGGAAAGCCTTCAGAGAAAGAACGCATGAGAGAGGATTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCATCCAAATGTGGTAGCTTTCTATGGTGTTGTGCTTGATGGGCCAGGAGGTTCTGTGGCAACAGTAACTGAGTATATGGCTAATGGTTCTCTAAGAAATGCCTTGCAGAGGAATGAAAGGAGTCTTGACATGCGCAAGCGTCTTTTGATTGCAATGGATGTTGCCTTTGGTATGGAGTACCTGCATGGAAAAAACATAGTACACTTTGACTTGAAAAGTGACAACTTACTTGTGAATCTCCGAGATCCATACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTGTCCAAAGTAAAGTGTCAGACACTTATCTCTGGCGGCGTGAGAGGAACTCTACCATGGATGGCCCCAGAACTGCTGAACGGAAGCAGCAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCATTCGGAATTGTGATGTGGGAACTCTTAACTGGAGAAGAGCCATACGCTGATTTGCACTATGGTGCTATTATAGGTGGTATTGTGAGCAACACTTTGCGCCCAGGGGTTCCTGATTCTTGTGATCTAGAATGGAAATTGCTGATGGAGAAGTGCTGGTCCTCAGAGCCATCAGAGAGACCTTCCTTCACTGAGATTGCCAATGAATTACGTTCTATGGCAGCCAAACGACAAAATCAACAGCTGCATCCCTCTTCCCCGCACACCCACCTCCACAAATAA 4035 0.4439 MAEELHVSPASTTPPTPNSARDLFYTPSASATTATWCVRPMAHPAAIGFNYGCGFGNRVAPGNALNLGNWVGANGLDKACNDSVAVNGYAYGGAVGGTRLCDEAGDDSVSGRKVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVRRDVSFNDLVQKMAETYGQPVVIKYQLPEEDLDALVSVSCPDDVENMMEEYEKLVEKSPDGSAKLRVFLFSASELELSAGAVQFGDLQDTGQKYFDAVNGLSDGNGISGGIKRKGSVTSAASTQNSDLSGIDTFDHSIAGQGEPMASPKENVAASPDISANLVMSEPSTAGTSAVSLGMPVAKTSPTHTPYFQNEVELEKSVPVTLSQQPFGLQQSGMEVSPHSPYLQPFVDTRQEVMNHADYVHLPPQMGFPNPHLLGKTGHVFTQQQFHDNTPTSLAFHQVNPGAQMTMTPPSSHVGVRPTVIQQQPLMQQQQNRLDQYSDENTSGIRIIQLPAEQSYNTYQVPVNQVPSVIVGGNYGWVQVPSQEPVVFSDGLLPQQQVMIPERIQRAEGCTMCQTKLPHAHSDPVVPDQHSSGAGPAPDSGPSYHSLPMEDIVKAQAKNRAKPMVTAPLKEGIIEQGAGTRHRVINKFEPPDGVPYTDNTGLSHNLEPQPEGGRIFMQKPEEFDHTRNSFIQETIGRTGGKQSPNDGLKAMGTSPLSYPDDGIHQHMVPGENWVKQEVLVNKPVNNDIPTVEGTTIQTSECMVQGSPNEYTNELIGAVSKSNEVDNWIRQGHLKPFDGRMDTFKIQNPEIYASNAHCLLPIDKHNGNDKLDYKSQLPLDEEVILDNNFGKSKLIVDANQIKMTGVVPSSSTEISYGHNYSSGEYNEVAQSPMLDIPCSNPQTKTGNHHKDDAASSLSSPSVRFGDVQDSPNSLFSNQDIWNIQHGTFFPPARPSNAALKKETYSHMDYFGENPGNCGKKNLEAQLDDGLYQSFKQNLTFEQGRSGKGSTEDQQLQAVAEDVAASVLHPCTPPNPNLHARDVSCRENIEDDDVQNNLIDDVKSKPPEKANFGFPAAVGVGRLQVIKNCDLEELSELGSGTFGTVYHGKWKGSDVAIKRITDRCFSGKPSEKERMREDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMANGSLRNALQRNERSLDMRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPYRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPGVPDSCDLEWKLLMEKCWSSEPSERPSFTEIANELRSMAAKRQNQQLHPSSPHTHLHK 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi588g00034 1344 Pfam Protein tyrosine and serine/threonine kinase 1060 1321 IPR001245 GO:0004672|GO:0006468
Sebi588g00034 1344 MobiDBLite consensus disorder prediction 548 575 - -
Sebi588g00034 1344 SMART serkin_6 1058 1324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi588g00034 1344 PANTHER SERINE-THREONINE PROTEIN KINASE 180 1323 - -
Sebi588g00034 1344 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1146 1336 - -
Sebi588g00034 1344 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1051 1145 - -
Sebi588g00034 1344 Pfam PB1 domain 133 216 IPR000270 GO:0005515
Sebi588g00034 1344 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 133 217 - -
Sebi588g00034 1344 MobiDBLite consensus disorder prediction 1 21 - -
Sebi588g00034 1344 Gene3D Transferase(Phosphotransferase) domain 1 1145 1343 - -
Sebi588g00034 1344 Gene3D Phosphorylase Kinase; domain 1 1051 1144 - -
Sebi588g00034 1344 PRINTS Tyrosine kinase catalytic domain signature 1292 1314 IPR001245 GO:0004672|GO:0006468
Sebi588g00034 1344 PRINTS Tyrosine kinase catalytic domain signature 1140 1153 IPR001245 GO:0004672|GO:0006468
Sebi588g00034 1344 PRINTS Tyrosine kinase catalytic domain signature 1177 1195 IPR001245 GO:0004672|GO:0006468
Sebi588g00034 1344 PRINTS Tyrosine kinase catalytic domain signature 1248 1270 IPR001245 GO:0004672|GO:0006468
Sebi588g00034 1344 MobiDBLite consensus disorder prediction 867 889 - -
Sebi588g00034 1344 MobiDBLite consensus disorder prediction 267 297 - -
Sebi588g00034 1344 Gene3D - 134 217 - -
Sebi588g00034 1344 MobiDBLite consensus disorder prediction 1325 1344 - -
Sebi588g00034 1344 CDD STKc_MAP3K-like 1064 1321 - -
Sebi588g00034 1344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1183 1195 IPR008271 GO:0004672|GO:0006468
Sebi588g00034 1344 ProSiteProfiles Protein kinase domain profile. 1058 1337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi588g00034 1344 ProSitePatterns Protein kinases ATP-binding region signature. 1064 1085 IPR017441 GO:0005524
Sebi588g00034 1344 CDD PB1_UP2 117 215 - -
Sebi588g00034 1344 SMART PB1_new 128 217 IPR000270 GO:0005515
Sebi588g00034 1344 SUPERFAMILY Protein kinase-like (PK-like) 1051 1320 IPR011009 -
Sebi588g00034 1344 SUPERFAMILY CAD & PB1 domains 129 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi588g00034 Sebi-Chr588 488114 493720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi588g00034 113 589 MAP Kinase Kinase Kinase AT3G46920 41.667 1.25e-90 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Sebi588g00034 PK_Tyr_Ser-Thr 5.8e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi588g00034 - - mtr:11439273 1831.99