Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi588g00021 ATGTTGAAAGTGAAGGAAGGGACGAGACCACCATGGGTGGGACTTGGAGCTGCTGCGTGGGTTCAAATTGCTGTTGGAAATGCTTACACTTTCCCTCTATACTCTCCCGCCTTCAAATCCGTTCTAGGTTTCAACCAGCGTCAGCTTACTCTTCTTGGTGTCGCTAATGATATTGGTGAGAACGTTGGCCTTCTTCCTGGTATTGCCTCCAACAAGCTCCCTCCTTGGCTTATTCTCTTCATTGGTGCTCTTCTCTGTTTCCTTGGTTTTGGTGTTCTCTGGCTCGCTATCTCTCAAACTATTCCTCCACCTCCTTACTTCGTGCTATGGATTGCACTTGTTATTGCTGCCAACAGTTGTGCATGGTTAACCACTTCTATTCTTGTAACCAACATGAGAAATTTCCCTGCAAGTAGAGGCACAGTTGCAGGGATCCTGAAAGGTTATGGAGGGATCAGTGCTGCAGTTTTTACTGAAGTTTTTAGGGCAGTTCTTAATAATTCTCCTTCCAATTTCCTGTTGTTCCTTACCCTTGGTATTCCTGCTTTATGCTTCAGTGTCATGTTTTTTGTTCGTCCTTGTACTCCTGCTTCAGGTGATAATCCTGCTGAAAAGGGGTATTTTCTTTTTATCCAAGTTTCAAGTGTGGTCTTAGGTGTTTATTTGCTTGTAACAACGACACTTGATTACATTCTCCCCATAAATCAGATAGTATCATACATTTTGGTGGTTGTGATGGTTCTCCTTCTCATGGCTCCACTTGCTATCCCTTTAAAGATGACACTTTATCCCAGAAAAGCCACTGAAGCAGAAACACCTGAGCAAAAAGTTGGATCTTCAGACTGGCAAATTCAAGAAGGCAAAGAAGACAACACAACACCCCTATTAACATCTTCATCAACCAGTGCCCTTGATCCAGATGGTTCATCTGAGGTGAGTAGGCTTCTTGCTGAGGGTGAGGGAGCTGTAGTACCAACAAAGAAGAGAAGGCCCAGACGAGGGGAAGATTTTAAATTTACTGAGGCTCTAGTAAAGGCTGATTTCTGGCTATTATTTTTTGTATACTTTGTTGGTGTTGGAACTGGGGTTACTGTTGTTAATAATCTGGCTCAAGTAGGAAATGCACAAGGTGTGGAAGATACATCTATCTTACTGTCAGTTTTCAGCTTTTTCAATTTTGTGGGTCGGCTTGGTGGAGGAATGGTTTCAGAACACTTTGTCAGGACCAAAACGATTCCACGGACAATTTGGATGACATTCACCCAGATAGTTATGATCATCTTGTACCTTTTGTTTGCCTATGCTGTCAATGGAACCCTTTATCCTGCAATTGCAATTCTTGGTATCTGCTATGGCGTGCAATTTTCCATATTGATTCCTACTGTCTCAGAGCTTTTTGGGTTGCAGCACTTTGGTTTATTTTTCAACTTCATGTGTTTGGTTAACCCACTTGGTGCACTCCTTTTCTCAGCTCTTCTAGCAGGGACTATTTATGATAATGAGACAGCAAAGCAGCATGGTCTAGGCCTCATTGGTTCAAGTCTTACCTGCTTGGGTCCAAATTGTTTTAAGGTCACCTTTTTGGTTCTGGCTGGTGTGTCTGCTGCGGGTAGCATCACGAGCATAATCTTGACTATAAGAATTAAGCCTGTTTACCAAATGCTTTATTCTGGGGGTTCTTTCAGGCTACCTCAAGCATCAGTTCACTAA 1710 0.4281 MLKVKEGTRPPWVGLGAAAWVQIAVGNAYTFPLYSPAFKSVLGFNQRQLTLLGVANDIGENVGLLPGIASNKLPPWLILFIGALLCFLGFGVLWLAISQTIPPPPYFVLWIALVIAANSCAWLTTSILVTNMRNFPASRGTVAGILKGYGGISAAVFTEVFRAVLNNSPSNFLLFLTLGIPALCFSVMFFVRPCTPASGDNPAEKGYFLFIQVSSVVLGVYLLVTTTLDYILPINQIVSYILVVVMVLLLMAPLAIPLKMTLYPRKATEAETPEQKVGSSDWQIQEGKEDNTTPLLTSSSTSALDPDGSSEVSRLLAEGEGAVVPTKKRRPRRGEDFKFTEALVKADFWLLFFVYFVGVGTGVTVVNNLAQVGNAQGVEDTSILLSVFSFFNFVGRLGGGMVSEHFVRTKTIPRTIWMTFTQIVMIILYLLFAYAVNGTLYPAIAILGICYGVQFSILIPTVSELFGLQHFGLFFNFMCLVNPLGALLFSALLAGTIYDNETAKQHGLGLIGSSLTCLGPNCFKVTFLVLAGVSAAGSITSIILTIRIKPVYQMLYSGGSFRLPQASVH 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi588g00021 569 CDD MFS_Mch1p_like 10 537 - -
Sebi588g00021 569 SUPERFAMILY MFS general substrate transporter 206 550 IPR036259 -
Sebi588g00021 569 Pfam Nodulin-like 11 258 IPR010658 -
Sebi588g00021 569 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Sebi588g00021 569 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 553 - -
Sebi588g00021 569 MobiDBLite consensus disorder prediction 289 309 - -
Sebi588g00021 569 Gene3D MFS general substrate transporter like domains 344 552 IPR036259 -
Sebi588g00021 569 Gene3D MFS general substrate transporter like domains 12 200 IPR036259 -
Sebi588g00021 569 MobiDBLite consensus disorder prediction 289 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi588g00021 Sebi-Chr588 234858 237310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi588g00021 2 569 Nodulin-like Gene Family AT1G80530 57.840 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi588g00021 - - gmx:100787328 800.816