Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi587g00005 ATGCTGTATCCTTCACGTAAAGGGACAATTGAAAGTTCTTATCAGTTCTCCAAACAAAATACAATTGGGAAAAAGTTCCATGGGTATAAAGGGGTTGGAATTATGATTGGAGTTGAAAATATCGTTAGTCGATATGACTTGGTTGAGAGTTACTGGGTTTTATTTACATATAAAGGGAACTGTGAGTTTGACATTAGAGTAGTGAATGGAAATTTGGAGGTCAATTATCCTAGGGTAGAAAGTGATGAAGATGTTGATGTCCAACCTGTGGAGTACGAGGAGGACCCTGAGGATGACCCTGAGGAGCTCCTATTTTTGTGGGAAGTTACTTTGACCAAGGCAGCTGCATCCGGTGCTAACGCTTTGCTCATACCTGCTAGGATTGTGAGGGACATATTGGACAAGAATCAGGAAGTTGTGACTATTATAGATGAGGGTGGTGAATTAATTCCATGCAAGCTTCTGAAGCCTAAGAGACGACCAAGTGAGCGGTACCTATCCAGTGGGTGGTATGAGTTTATTCGGGGAAAGAAATTGAAGGCTGGGGATAAGATAAGATTTTATTCAGATGATTGTATGGAATCATTGTCTGCGGTTGTAGATCGCATTTGA 612 0.4118 MLYPSRKGTIESSYQFSKQNTIGKKFHGYKGVGIMIGVENIVSRYDLVESYWVLFTYKGNCEFDIRVVNGNLEVNYPRVESDEDVDVQPVEYEEDPEDDPEELLFLWEVTLTKAAASGANALLIPARIVRDILDKNQEVVTIIDEGGELIPCKLLKPKRRPSERYLSSGWYEFIRGKKLKAGDKIRFYSDDCMESLSAVVDRI 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi587g00005 203 SUPERFAMILY DNA-binding pseudobarrel domain 106 196 IPR015300 -
Sebi587g00005 203 CDD B3_DNA 110 191 IPR003340 GO:0003677
Sebi587g00005 203 Pfam B3 DNA binding domain 108 191 IPR003340 GO:0003677
Sebi587g00005 203 Gene3D - 88 202 IPR015300 -
Sebi587g00005 203 ProSiteProfiles B3 DNA-binding domain profile. 107 203 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi587g00005 Sebi-Chr587 244166 246354 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi587g00005 B3 1.8e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi587g00005 - K14486 lja:Lj6g3v0497350.1 55.4546