Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi586g00010 ATGCAAATCAACAATATCCACTCAGAGTCAGAGGGAACCATGAATGAAGACTTGGAGAACAACAACACAGAGACACCACAGGACATGTCACATTCGATGGTGAAAAAGAAGTCAGATCCAGTTCTGGTCACAAATAGCAACGCTCGTTTTCAAATGCTTAGAAGTTTCATGACCAATTTGCATGTGGTCGTTCTTGCCACTAAGCTTGTGGTGCTTTTTCCGGCAGTCCCATTAGCCGTTGCTGCAAATTTTTATAACTTTGGAAGGCCTTGGATATTTGCTTTCAGCCTGCTTGGACTAGCTCCGTTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCATATTATACTGGCCCAACAGTTGGAGGGCTTTTGAATGCAACATGTGGCAATGCAACGGAGATGATCATATCATTATTAGCACTTCACAAGAACAAAATACATGTTGTCAAGTTCTCCCTGCTTGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTTGGTAGCTCACTCCTCTGTGGTGGCTTAGCTAATCTTAAAAGAGAGCAAAGATATGACAGAAAACAGGCAGATGTAAATTCACTGCTTTTGTTGCTGGGGTTGCTATGCCATTTACTGCCATTACTGTTCAGATATGCGTTGGCAGGGGGCAATTACTCTGTAGCCACTTCAACTCTTCAATTGTCAAGAGCATGCAGCATTCTTATGCTTCTAGCATATGTTGCTTATATCATCTTCCAATTAAAAACTCATCGCAAATTGTTTGATGCACAAGAGGAAGAAGATGATGAAGATAAGGCAGTGATAGGATTTTGGAGTGCATTTACTTGGTTGGTGGGTATGACACTGGTCATATCTTTGCTTTCTGAATATGTTGTTGGAACCATTGAGGCTGCTTCAGATTCTTGGGGCATTTCTGTTAGCTTCATTAGCATAATTTTGTTACCAATTGTTGGGAACGCCGCAGAACATGCTGGTTCAATCATATTTGCTTTTAAAAACAAGTTGGATATATCTCTGAGTGTTGCAATGGGATCTGCCACTCAAATTTCAATGTTTGTGGTTCCATTAAGTGTGGTAGTTGCATGGATAATGGGAATTCGAATGGATCTAGACTTCAATCTTCTTGAAACTGGATGTCTTGCTTTTGGAATTATAGTTACAGCGTTCACTTTACAGGATGGAACTTCACACTACATGAAAGGAGTTGTTCTTACTTTATGTTACATTGTCATTTCTGCATGTTTTTTTGTTCTCAAAACTCCACTAACCAACCAATATCCTAAGGTCAATTTTGGAGCTAAAGTATCCTTTGATGACACCTCCACTTGA 1332 0.4039 MQINNIHSESEGTMNEDLENNNTETPQDMSHSMVKKKSDPVLVTNSNARFQMLRSFMTNLHVVVLATKLVVLFPAVPLAVAANFYNFGRPWIFAFSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIISLLALHKNKIHVVKFSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFRYALAGGNYSVATSTLQLSRACSILMLLAYVAYIIFQLKTHRKLFDAQEEEDDEDKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLSVAMGSATQISMFVVPLSVVVAWIMGIRMDLDFNLLETGCLAFGIIVTAFTLQDGTSHYMKGVVLTLCYIVISACFFVLKTPLTNQYPKVNFGAKVSFDDTST 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi586g00010 443 MobiDBLite consensus disorder prediction 1 37 - -
Sebi586g00010 443 NCBIfam calcium/proton exchanger 74 417 IPR004798 GO:0006816|GO:0015369
Sebi586g00010 443 MobiDBLite consensus disorder prediction 1 29 - -
Sebi586g00010 443 Pfam Sodium/calcium exchanger protein 91 248 IPR004837 GO:0016020|GO:0055085
Sebi586g00010 443 Pfam Sodium/calcium exchanger protein 274 414 IPR004837 GO:0016020|GO:0055085
Sebi586g00010 443 NCBIfam calcium/proton exchanger 55 417 - -
Sebi586g00010 443 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 21 420 IPR004713 GO:0006812|GO:0008324|GO:0016020
Sebi586g00010 443 FunFam Vacuolar cation/proton exchanger 264 418 - -
Sebi586g00010 443 Gene3D - 269 417 IPR044880 -
Sebi586g00010 443 Gene3D - 120 268 IPR044880 -
Sebi586g00010 443 FunFam Vacuolar cation/proton exchanger 120 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi586g00010 Sebi-Chr586 379199 384074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi586g00010 24 422 Antiporters AT2G38170 66.585 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi586g00010 K07300 - gmx:100816844 662.144