Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi586g00009 ATGGCCAACATTTTACTTTTCCAACATATTGCCTTTACTGGAAGCTCTGCAACTGGGAGCAAAATCATGACAGCTGCAGCTCAGCTGGTCAAGCCTGTTTCGCTAGAGCTTGGTGGAAAAAGCCCAATCATTGTTTTTGAGGATGTTGACCTTGATAAGGCTGCTGAATGGACCATCTTTGGCTGCTTCTGGACAAATGGTCAGATATGCAGTGCAACTTCCCGCCTTATTGTCCATCTTGCATCTGTGCTCACCTCTATTCTGTCATAA 270 0.4519 MANILLFQHIAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPIIVFEDVDLDKAAEWTIFGCFWTNGQICSATSRLIVHLASVLTSILS 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi586g00009 89 SUPERFAMILY ALDH-like 7 79 IPR016161 GO:0016491
Sebi586g00009 89 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 43 79 IPR016163 GO:0016620
Sebi586g00009 89 Pfam Aldehyde dehydrogenase family 7 79 IPR015590 GO:0016491
Sebi586g00009 89 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 7 42 IPR016162 GO:0016491
Sebi586g00009 89 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 35 42 IPR029510 GO:0016491
Sebi586g00009 89 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 8 86 - -
Sebi586g00009 89 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 63 74 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi586g00009 Sebi-Chr586 376197 376799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi586g00009 8 79 Aldehyde Dehydrogenase Gene Family AT1G74920 86.111 6.26e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi586g00009 K00130 - gmx:100170731 143.665