Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi584g00021 ATGGCTGGAAAATGGAGGTGCCATTGGGCTTGGAGCTGCATGTTGTTGTTGGTCCTTGCACCAGTGTATACCATTTCAGAATTCACTAGAAAGTCAGTAGTTATGGACACAGAGAAAGAGAAGAACTCTATGCATCACAAACAAGGCAGAAGGAAACTAGATGATGTAGCTGGCTCTATTTGCATTGATTGTGGGCTACCAGGAGAGCTCACCTACACTGATGACAACACTCAGATACATTACACTTCAGATACAGAGTTCATTGACACTGGAACAAGCAAAAACATATCCCTCATCATTTCTGAAACTCTCCAAAGAGCGTTCCAAACTGTGAGAAGCTTTCCTGATGGTAAAAGGAATTGCTACACACTAAGACACCCTGAAGGCAAAGACACTATTTACTTGATCAGAGCTTCTTTCATGTATGGGAACTATGATAACTTGAATCAGCTACCCCAATTTGAACTTTATGTTGGGGTTAATTTATGGGACTCTGTGAGATTTGACAATGCCACTCATGTGGTAATCAAGGAGATTTTATACGTGCCATCTATGGATAATTTATATGTTTGTTTATTGAATACTGATTCAGGAACTCCTTTTATATCAGCACTGGAGGTGAGGCATTTACATCCTTCCAGTTATAGAACCAAATCTGGACCCTTAGCTCTATATAGACGTTTGGACATTGGCTCAACAACTGATGAAATAGTGAGGTTTAACAAAGATGCTTATGATAGAATATGGTTTCCTTACAATTTACCTGGTTCCACACCACTCAGTACTTCCTTCACCATTGATTCCTTGAACCATACTGCATATCACCTGCCATCAACAGTAATGAAAACTGCTGTGAGGCCTACAAATGATAATGGTTCCCTGGAATTTGAATTTGACACTGGATATCCTACTTCAGAGTCCTATGTTTACATGCATTTCGCTGAAATTGAGGAGCTTCAGGAAAATGAAAAGAGGGAATTTGACATCACATTGAATGGCAACTTATGGGCTGAGTCAGTAACTCCTCAGTATTTGCACTCAACTACAATAGATGGACAACAGTCCATTAGGGGATCTAAGCTCATGTTCTCTATGCACAAGAAACCAAATTCTACCCATCCTCCCATTCTAAATGCAATGGAGATTTACATTGTTAAGCAATTCTTGCAAGCACCTACAGACCAAGAAGATGTTAAGGCTATCATGGACATCAAGTCACATTACTTGTCGACATCCTCCTTGGGTAAATCATGGCAAGGAGATCCTTGTGCACCATTGGAATCCTCTTGGAATGGTCTCAAATGCAATAATAATGGATATGAGCCACCCAGAATAACTGCACTAAACCTAGCCTCCAGTGGATTGGATAGCACAATAATAGCATCATTTTTGGAGCTCAGATTCTTAGAATCCTTGGATTTATCAAATAATAGCTTAACAGGATCACTGCCTGATTTTTCACAACTGCAATACTTGAAGGCTCTCAATTTATCAGGGAACAGGCTCTCGGGTGAAATTCCTTCACTTCTCAATGAAAGATCAAATAATGGTTCCCTTTTGTTGAGTGTGGATGGAAATCCGGATCTCTGCCTGGTGGCCCCATGCAAAGGGGAGAAAAAGAATATTGTCCCACTTGTTGCAGGCATTCTCTCAGCAGTGATCTTTTCAAGTGTACTGGGTATTGTATTGACTATCATTTGGAGGCGTAGATGCAAGAGTAAACCAGAGTCAAAGCAAGGTGAGAGATCAAGAGAAGAAGTTGTGTTGAAGTTAAACAAGAAACAGTTTACATACTCTCAGATGGTAGCTATTACCAACAACTTTGAGAAAACTATTGGGAAGGGAGGAAGTGGAATTGTTTATCATGGTTCCTTATACGATGGCACACAAGTTGCTGTCAAAATTCTCGTGTCAAAATCACCTCAAGGTTCTCAGCAGTTTCAGACTGAGGCTGAACTTTTAATGCGAGTTCATCATAGGAACTTAGCTTCCTTTCTTGGATACTGTAATGAAGTTGGCAACACTGCTATCATCTATGAATACATGGCTTATGGGAACTTAGAGGAGTATCTTTCAGATGCAGGGAGAGAATCGTTGAGTTGGAGACAAAGGATTCAGATAGCAGTTGATGCTGCTCAAGGTATTGAGTACTTGCATCATGGCTGCAAGCCGCCAATAATCCATCGAGACATTAAGACCGCAAACATTTTACTGAACGATAAAATGGAAGCAAAAGTAGCTGATTTTGGTTTCTCAAAATTTTTCTCAACCGAAAGTGAAAGTCATATATCAACAGCAGTTATTGGGACATTTGGATATCTTGATCCAGAATACTATACATCCAGCAGGCTGACTGAGAAAAGCGATGTCTACAGTTTTGGTATTGTGCTTTTAGAGCTTATTACTGGGCAGCCAGCCATAATAAAAGGTCAGGAGAACATTCACATTGTGCAATGGGTCAGTCACTTTCTTGCAAGAGGGGATATCCGACAAATTGTTGATCCAAGGATGCAGGGAGATTTTGATTCTGGTTGTGTGTGGAAGGCTGTGGAGGCAGCAATAGCTTGTGTACCTCCAATATCTATCCAAAGGCCATCAATGAGTTACGTTGTCACGGAACTGAAAGAGTGCTTAGAAATGGAAGCAGCTCGAGAACAAGAAGGCACCGACGATCAAATTTCAAAATCAAACTCGTTTGAAATGAATGTTGTTGATCCTGAGGTTAATGATGGTCCGGGCGCAAGATGA 2748 0.4068 MAGKWRCHWAWSCMLLLVLAPVYTISEFTRKSVVMDTEKEKNSMHHKQGRRKLDDVAGSICIDCGLPGELTYTDDNTQIHYTSDTEFIDTGTSKNISLIISETLQRAFQTVRSFPDGKRNCYTLRHPEGKDTIYLIRASFMYGNYDNLNQLPQFELYVGVNLWDSVRFDNATHVVIKEILYVPSMDNLYVCLLNTDSGTPFISALEVRHLHPSSYRTKSGPLALYRRLDIGSTTDEIVRFNKDAYDRIWFPYNLPGSTPLSTSFTIDSLNHTAYHLPSTVMKTAVRPTNDNGSLEFEFDTGYPTSESYVYMHFAEIEELQENEKREFDITLNGNLWAESVTPQYLHSTTIDGQQSIRGSKLMFSMHKKPNSTHPPILNAMEIYIVKQFLQAPTDQEDVKAIMDIKSHYLSTSSLGKSWQGDPCAPLESSWNGLKCNNNGYEPPRITALNLASSGLDSTIIASFLELRFLESLDLSNNSLTGSLPDFSQLQYLKALNLSGNRLSGEIPSLLNERSNNGSLLLSVDGNPDLCLVAPCKGEKKNIVPLVAGILSAVIFSSVLGIVLTIIWRRRCKSKPESKQGERSREEVVLKLNKKQFTYSQMVAITNNFEKTIGKGGSGIVYHGSLYDGTQVAVKILVSKSPQGSQQFQTEAELLMRVHHRNLASFLGYCNEVGNTAIIYEYMAYGNLEEYLSDAGRESLSWRQRIQIAVDAAQGIEYLHHGCKPPIIHRDIKTANILLNDKMEAKVADFGFSKFFSTESESHISTAVIGTFGYLDPEYYTSSRLTEKSDVYSFGIVLLELITGQPAIIKGQENIHIVQWVSHFLARGDIRQIVDPRMQGDFDSGCVWKAVEAAIACVPPISIQRPSMSYVVTELKECLEMEAAREQEGTDDQISKSNSFEMNVVDPEVNDGPGAR 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi584g00021 915 Gene3D Phosphorylase Kinase; domain 1 588 681 - -
Sebi584g00021 915 SUPERFAMILY Protein kinase-like (PK-like) 589 874 IPR011009 -
Sebi584g00021 915 Gene3D Transferase(Phosphotransferase) domain 1 682 903 - -
Sebi584g00021 915 SMART serkin_6 606 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi584g00021 915 CDD STKc_IRAK 612 876 - -
Sebi584g00021 915 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 682 887 - -
Sebi584g00021 915 FunFam Leucine-rich repeat receptor-like protein kinase 579 681 - -
Sebi584g00021 915 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524
Sebi584g00021 915 PANTHER OS07G0107800 PROTEIN-RELATED 60 878 - -
Sebi584g00021 915 SUPERFAMILY L domain-like 416 510 - -
Sebi584g00021 915 ProSiteProfiles Protein kinase domain profile. 606 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi584g00021 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Sebi584g00021 915 Pfam Leucine rich repeat 443 502 IPR001611 GO:0005515
Sebi584g00021 915 FunFam Leucine-rich repeat receptor-like kinase 396 531 - -
Sebi584g00021 915 Pfam Protein tyrosine and serine/threonine kinase 608 818 IPR001245 GO:0004672|GO:0006468
Sebi584g00021 915 PRINTS Leucine-rich repeat signature 489 502 - -
Sebi584g00021 915 PRINTS Leucine-rich repeat signature 469 482 - -
Sebi584g00021 915 ProSiteProfiles Leucine-rich repeat profile. 491 513 IPR001611 GO:0005515
Sebi584g00021 915 ProSiteProfiles Leucine-rich repeat profile. 468 490 IPR001611 GO:0005515
Sebi584g00021 915 MobiDBLite consensus disorder prediction 885 915 - -
Sebi584g00021 915 Gene3D Ribonuclease Inhibitor 396 522 IPR032675 -
Sebi584g00021 915 Pfam Malectin-like domain 62 384 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi584g00021 Sebi-Chr584 378284 382896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi584g00021 52 889 Receptor kinase-like Gene Family AT2G19210 47.412 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi584g00021 Malectin_like 9.5e-112 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi584g00021 - - gmx:100791717 1464.13