Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi584g00015 ATGGCGAAATCAAGCTCAACCACGATAACATTCAAACCAACATGGGTTCTTTCGTACCGTACCCAACACATAACAGAGGTGTACACGATGGGTAGAAAATTGGGTCAGGGTCAATTTGGGACAACGTACCTTTGCACTCACAAGGTAACAGGTGGTAGGTACACTTGCAAGTCTATTCCGAAATGGAAGCTTCTGTGCAAAGAGGATTACGACGACGTTTGGAGGGAGATTCAGATAATGCACCACTTGTCTGAACACCCTCATGTGGTGCAAATCGAAGGAACCTATGAGGATTCCTCTGCTGTTCACATGGTTATCGAGCTATGTGAAGGAGGAAAGATATTTGACAGGATCGTGCAGAAGGGTCACTACAGTGAGAGACAAGCTATGAAGTTGAAAAAGACTATTGTTGAGGTTGTGGAGTCTTGTCACTCTCTTGGGTTTATGTATATAGACCTTAAGCCTGAGAACTTTCTCTTTGATACTGTTGATGAGGATGCTAAACTCAAAGCCACCTTTTTGTTATGCTTCTTCACAAAATCAGCAGCTTAA 552 0.4312 MAKSSSTTITFKPTWVLSYRTQHITEVYTMGRKLGQGQFGTTYLCTHKVTGGRYTCKSIPKWKLLCKEDYDDVWREIQIMHHLSEHPHVVQIEGTYEDSSAVHMVIELCEGGKIFDRIVQKGHYSERQAMKLKKTIVEVVESCHSLGFMYIDLKPENFLFDTVDEDAKLKATFLLCFFTKSAA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi584g00015 183 FunFam Calcium-dependent protein kinase 1 30 113 - -
Sebi584g00015 183 SMART serkin_6 28 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi584g00015 183 Pfam Protein kinase domain 28 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi584g00015 183 Gene3D Transferase(Phosphotransferase) domain 1 67 169 - -
Sebi584g00015 183 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Sebi584g00015 183 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 172 - -
Sebi584g00015 183 SUPERFAMILY Protein kinase-like (PK-like) 6 161 IPR011009 -
Sebi584g00015 183 Gene3D Phosphorylase Kinase; domain 1 32 108 - -
Sebi584g00015 183 ProSiteProfiles Protein kinase domain profile. 28 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi584g00015 Sebi-Chr584 280006 280557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi584g00015 16 182 EF-hand Containing Proteins AT1G35670 68.452 2.02e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi584g00015 Pkinase 3.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi584g00015 K13412 - lja:Lj4g3v2860560.1 291.197