Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi584g00014 ATGTACAGAGCAGCAGCTTCACGTCTCAACCTTCTCAAGGGCAATGGGAGAACCTTAGGAGCCACTAGGTGTGCTACCTCAGGTGCAGTAGCTACAAGGCCTGTTTCAGGTGGCTTTTTCAGCTGGCTTACAGGGGAAACTTCCAGTACTCTTCCTCCTCTTGACATACCACTTGGAGGGGTTGCCCTCCCAGTTACACTGCCAGATTATGTTGAACCAAGCAAGACCAAGATCACAACTCTCTCCAATGGTCTCAAAATTGCATCAGAGACCTCACCAAACCCTGCAGCCTCAATAGGGTTATATATTGACAGTGGTTCCCTCTATGAGACACCATTTTCAAGCGGGGCAACTCACTTGCTGGAGAAATTGGCTTTCAAGAGCACAACAAACCGAAGTCACTTTCGTATTGTAAGGGAAATAGAAGCAATTGGTGGTAATGTAGGAGCCTCAGCCTCTCGGGAGCAAATGGGCTACACATTTGATGCTCTAAAAACCTATGTTCCACAAATGATTGAATTGCTAGTTGACTGTGTAAGAAACCCAGCCTTCTTGGATTGGGAGGTCAATGAAGAGCTTCAAAAGGTGAAAGCAGAGCTTGGAGAACTATCAAACAATCCCCAGGGCTTACTTTTGGAGGCAATTCACTCTGCTGGTTATTCTGGCGCATTGGCTAATCCACTTTTGGCTTCTGAATCAGCACTTCACAGATTAAATGGCTCCATTTTAGAGGAATTTGTTTTTGAAAATTATACTGCACCTAGGATGGTACTTGCCGCTTCTGGGGTTGAGCATGAAGAACTTTTATCTGTTGCTGAGCCACTCCTGTCTGATCTACCAAATGTTCCCCGTCCGGAGGAACCAAAATCTACCTATGTCGGAGGTGATTTCCGTCGTCAAGGTGAATCAGGGGGTGCACATGTAGCTATAGCCTTTGAGGTGCCTGGTGGCTGGCAAAAAGAGAAAGATGCTATTGTTTTGACTGTTTTACAGATGCTTATGGGAGGAGGTGGATCATTCTCAGCAGGGGGGCCTGGAAAAGGGATGCACTCAAGGCTATATCTTCGTGTCTTGAATGAATATCAACAGATTCAATCTTTTTCTGCATTCAACAGTATCTTCAACAATACAGGATTGTTTGGCATATGCGCAAGCACCGCTGGGATGATATATCTGGGAGAAGAGAATTTTGCATGGCTTCTCAATGACCTTTCAGTTGTCAGCTCTGATTTTGTGGCAAAAGCTGTGGATATAGCAGCCAAAGAATTAATAGCAATTGCGTCACCAGGACAAGTTTCACAAGTACAACTTAACCGTGCCAAAGAATCCACAAAGTCTGCAGTTCTAATGAATCTGGAATCCAGAATGATTACATCAGAGGATATAGGAAGGCAGATATTGACATACGGAGAAAGGAAGCCCGTGGAGCAGTTCTTGAAGACGGTTGATGAGATCACTTTGAATGATATCACAAAAATTGCTCAGAAGATTATTTCCTCACCTCTGACTATGGCATCCTATGGGGATGTAATGAGTCATGATTTCCTTGTTTTATGTCATTTTTGTTGCAGTTATCAATGTCCCCAGTTACGAATCCGTCAGCAGCAAGTTCCATGCAAAATGAAGTTGCTTCTGAATGATGAGAATAGGAGTAATGGTCGGGTTGATGATTTCGGAATTCAAATTTCTAATACTGTAGATATGATTTATCTCAGAGTCATAATTCAGTGGGCCCAGCAGAAAGGAAGAGCTGTAAGGAATAACGAAGGAAACGTGAAGGGCACTCGAGTGTTGAAGACTACTTTTGGTTGTGCGCGCCAATCTCAATCCCAAAGCAAAGATATCAGGTCAGAGATGTCGTGGCAAACTTACGTGGATGAACACCTCATGTGTGATATCGATGGCCACACCCTCACCTCCGCCGCCATCATCGGCCAAGACGGCACCGTCTGGGCTCAGAGCTCCAACTTCCCTCAGTTTAAGGGTGAAGAAATTGAAGCGATTATGAAAGATTTTGATGAGCCGGGTAGCCTTGCCCCAACGGGCTTACACCTTGGTGGTACCAAGTACATGGTCATCCAAGGAGAATCCGGAGCTGTTATCCGCGGCAAGAAGGGTGCTGGCGGGATCACTGTTAAGAAAACGAATCAAGCTATGGTTATTGGTATTTATGAGGAACCTCTGACACCAGGACAGTGTAACATGATTGTTGAGAGGCTGGGAGATTATTTGATTGAGCAGGGGCTGTAG 2250 0.4507 MYRAAASRLNLLKGNGRTLGATRCATSGAVATRPVSGGFFSWLTGETSSTLPPLDIPLGGVALPVTLPDYVEPSKTKITTLSNGLKIASETSPNPAASIGLYIDSGSLYETPFSSGATHLLEKLAFKSTTNRSHFRIVREIEAIGGNVGASASREQMGYTFDALKTYVPQMIELLVDCVRNPAFLDWEVNEELQKVKAELGELSNNPQGLLLEAIHSAGYSGALANPLLASESALHRLNGSILEEFVFENYTAPRMVLAASGVEHEELLSVAEPLLSDLPNVPRPEEPKSTYVGGDFRRQGESGGAHVAIAFEVPGGWQKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGICASTAGMIYLGEENFAWLLNDLSVVSSDFVAKAVDIAAKELIAIASPGQVSQVQLNRAKESTKSAVLMNLESRMITSEDIGRQILTYGERKPVEQFLKTVDEITLNDITKIAQKIISSPLTMASYGDVMSHDFLVLCHFCCSYQCPQLRIRQQQVPCKMKLLLNDENRSNGRVDDFGIQISNTVDMIYLRVIIQWAQQKGRAVRNNEGNVKGTRVLKTTFGCARQSQSQSKDIRSEMSWQTYVDEHLMCDIDGHTLTSAAIIGQDGTVWAQSSNFPQFKGEEIEAIMKDFDEPGSLAPTGLHLGGTKYMVIQGESGAVIRGKKGAGGITVKKTNQAMVIGIYEEPLTPGQCNMIVERLGDYLIEQGL 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi584g00014 749 PRINTS Plant profilin signature 702 717 IPR005455 GO:0003779
Sebi584g00014 749 PRINTS Plant profilin signature 689 698 IPR005455 GO:0003779
Sebi584g00014 749 PRINTS Plant profilin signature 645 658 IPR005455 GO:0003779
Sebi584g00014 749 PRINTS Plant profilin signature 670 684 IPR005455 GO:0003779
Sebi584g00014 749 PRINTS Plant profilin signature 619 632 IPR005455 GO:0003779
Sebi584g00014 749 PRINTS Plant profilin signature 722 735 IPR005455 GO:0003779
Sebi584g00014 749 PRINTS Plant profilin signature 735 748 IPR005455 GO:0003779
Sebi584g00014 749 Gene3D - 68 278 - -
Sebi584g00014 749 SUPERFAMILY LuxS/MPP-like metallohydrolase 75 285 IPR011249 GO:0046872
Sebi584g00014 749 Gene3D Dynein light chain 2a, cytoplasmic 617 749 - -
Sebi584g00014 749 PANTHER METALLOPROTEASE 69 511 - -
Sebi584g00014 749 FunFam Profilin 619 749 - -
Sebi584g00014 749 ProSitePatterns Insulinase family, zinc-binding region signature. 106 129 IPR001431 GO:0004222|GO:0006508
Sebi584g00014 749 CDD PROF 620 748 IPR005455 GO:0003779
Sebi584g00014 749 SUPERFAMILY LuxS/MPP-like metallohydrolase 301 510 IPR011249 GO:0046872
Sebi584g00014 749 Gene3D - 285 515 - -
Sebi584g00014 749 SMART prof_2 619 749 IPR005455 GO:0003779
Sebi584g00014 749 SUPERFAMILY Profilin (actin-binding protein) 620 748 IPR036140 -
Sebi584g00014 749 PRINTS Profilin signature 658 678 IPR005455 GO:0003779
Sebi584g00014 749 PRINTS Profilin signature 621 630 IPR005455 GO:0003779
Sebi584g00014 749 PRINTS Profilin signature 731 748 IPR005455 GO:0003779
Sebi584g00014 749 PRINTS Profilin signature 639 648 IPR005455 GO:0003779
Sebi584g00014 749 PRINTS Profilin signature 682 696 IPR005455 GO:0003779
Sebi584g00014 749 PRINTS Profilin signature 718 731 IPR005455 GO:0003779
Sebi584g00014 749 FunFam Mitochondrial-processing peptidase subunit beta 66 281 - -
Sebi584g00014 749 Pfam Profilin 619 748 IPR005455 GO:0003779
Sebi584g00014 749 Pfam Peptidase M16 inactive domain 243 442 IPR007863 -
Sebi584g00014 749 FunFam mitochondrial-processing peptidase subunit alpha 290 515 - -
Sebi584g00014 749 Pfam Insulinase (Peptidase family M16) 87 230 IPR011765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi584g00014 Sebi-Chr584 273742 279282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi584g00014 619 749 Cytoskeleton Gene Families AT4G29340 78.358 8.87e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi584g00014 K01412 - gmx:100794691 811.216