Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi584g00013 ATGGGGAAAGCTACCAGGTGGTTGAAGGGGTTGTTGGGAATGAAAAAAGAGAAGGACCACTGTGACAAATCAGGCTCATTGGCTCAGGGCAAGAAGGAGAAGAAAGGGTCAGGGGAGGATGAACAGAGTCACATTACTTTCAGAGCCTATGTTGCTGAAAAAGAGGATGAACAGAACAAACACACAATTGCTGTGAGATCATTAAGCCATGGAAGAGGCACATTTTTTAGAGTAAGCAGGGAAAGGTGGGCTGCTCTAAAGATCCAAACTTTGTTCAGAGGCTATTTGGCACGAAAGGCTCTTAGAGCACTCAAAGCATTGGTTAAGATACAGGCTCTTGTTAGAGGGTATCTAGTTCGAAAAAGGGTTGCTGCAACTCTTCACAGTATGCAAGCTCTGATGAGAGCTCAATCCACTGTCCGGTCACAGAGAGCTCGTCGTTCCATCAACAAGGAGAATACATTTCCAAGAAAATATGTGCAACTGTTTGATGAAACAAGAAATGAATCACAAAGTAAAGGGCTACCCACATCTTATGATACATCCTTGAATGGTTTTGTTCAGAGTCCAAAAGTTGTTATGATTGACACTCAAAGTCACAGGACCTGTTCAAGGTCTAGGTGCATTACCACTACAAATACAATGTCTGAATGTGGAGAAGATTTGCACTATCAAGCAATATCATCATCACCCTCTCTTACTTATCAAGTTCCTGGTCGAATCTCAGTTCATGAATGCCAACATCCTCAAGATTTTGAATGGTACTTCAATGTTGATGAACGCAAATTCTCCACAGCTCAGAACACACCTCGTTTAGCAAATTGTGGAGATACCTTCTTCCAGAATTACTCCAATTTTCCTAGTTACATGGCCAATACTCAATCATCTAAGGCAAAATTAAGGTCTCATAGCGCTCCAAAGCAAAGACCTGAGCCCAAGAAAAGGTTTCCACTCAATGAAATAATGGCCACTAGAAATAGCATAAGTGGTGTTAGAATGCAGTGGTCATCCAATTCTCAAACTAGAGATTACTCTTGTTTTGACAGGGTTTGA 1053 0.416 MGKATRWLKGLLGMKKEKDHCDKSGSLAQGKKEKKGSGEDEQSHITFRAYVAEKEDEQNKHTIAVRSLSHGRGTFFRVSRERWAALKIQTLFRGYLARKALRALKALVKIQALVRGYLVRKRVAATLHSMQALMRAQSTVRSQRARRSINKENTFPRKYVQLFDETRNESQSKGLPTSYDTSLNGFVQSPKVVMIDTQSHRTCSRSRCITTTNTMSECGEDLHYQAISSSPSLTYQVPGRISVHECQHPQDFEWYFNVDERKFSTAQNTPRLANCGDTFFQNYSNFPSYMANTQSSKAKLRSHSAPKQRPEPKKRFPLNEIMATRNSISGVRMQWSSNSQTRDYSCFDRV 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi584g00013 350 SMART iq_5 80 102 IPR000048 GO:0005515
Sebi584g00013 350 SMART iq_5 103 124 IPR000048 GO:0005515
Sebi584g00013 350 ProSiteProfiles IQ motif profile. 105 132 IPR000048 GO:0005515
Sebi584g00013 350 MobiDBLite consensus disorder prediction 294 315 - -
Sebi584g00013 350 ProSiteProfiles IQ motif profile. 81 109 IPR000048 GO:0005515
Sebi584g00013 350 PANTHER IQ-DOMAIN 5-RELATED 1 326 - -
Sebi584g00013 350 Gene3D - 42 105 - -
Sebi584g00013 350 Gene3D - 106 154 - -
Sebi584g00013 350 Pfam Protein of unknown function (DUF4005) 262 329 IPR025064 -
Sebi584g00013 350 Pfam IQ calmodulin-binding motif 105 122 IPR000048 GO:0005515
Sebi584g00013 350 Pfam IQ calmodulin-binding motif 82 102 IPR000048 GO:0005515
Sebi584g00013 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 124 IPR027417 -
Sebi584g00013 350 MobiDBLite consensus disorder prediction 16 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi584g00013 Sebi-Chr584 229160 230815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi584g00013 1 333 IQD Protein Family AT3G16490 45.103 5.96e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi584g00013 - - gmx:100797686 399.823