Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi583g00029 ATGCAAGATATGAAGCAGCAGAAGCAGAAGCAGGTGGCCACTGAAGAATCTAAGAAGAAGGAGCGTCACATTGTGACGTGGACTCAAGAGGAGGATGATATACTCAGAGAGCAGATTGGCATCCATGGAACTGAAAAATGGTACACATACTTGAATTCTGATTTCAAGAAAGGAGGATGGTCACCGGAGGAAGACATGCTCTTATGTGAGGCTCAAAAAATATTTGGCAATAGGTGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAATGCTGTGAAAAACCGTTTCTCCACATTGTGCAAAAAGAGAGCAAAATATGAAGCCTTAGCAAAAGAGAACAACACTTCATACATCAATTCAAATAACAAAAGGATTATTTTTCAACAAGGGTATAATACAGATGCAGCATCAGAATCTACAGTAGCTGTCAAGAGGATGAGGAGGTCACATATCCCTGATGGTGCAGAAAAGAGCAACTTTGCAGATAGATCACATAAACAAAATGGAACTCCAATAAATCAGCAGTCAAGAGCACCATTTGCAGTTTTAGCTCAAAACTCTCATAATGTCAACAACTTGCCAGACCAGCCTCATGTCTGCAATGTGAAGTTTAGTGGTTATGCCCAAAACAACAAGATTCAAGGAACATTCCTTAAAAAGGATGACCCAAAGATAAGCGCATTGATGCAACAAGCAGAGCTACTAAGTTCACTAGCTCTAAAAGTTGATGCAGAGAACATGGACCAAAGTCTTGAAAATGCATGGAAGGTTCTTCAAGAGTTTCTGAACCGAACCAAAGAATCAGATATTCCTGGATATAAGCTTCCAGATTTACAGCTTGTAGATCTTAAAGATTTATTGGAAGACTTAAAGTGTAGTAGTGAGGAAATCCAGCCATGTTGGAGGCACATGGACCTATATGAAGACTCTCCAGGCAGCTCTGAAAACAGTTCGGGATCAACTATCCTGCCTCATTGTGCTGGTGATAATTTGGAACACTCACTGCATCAGGATATTGGAACTGAACTGAAGTCTATACAAATTGGAGATCAAAAAGGAGTTGGAGGATGTGGTCAAATGGTGCTTTCTAGTGCAACTTTGGATCAAAATATATTCCCATCTTGTGAGGAACATATGAACAATGATTGCATTGTTCCTGCCTTATCAAGTACAGAATTCAGTTCCCCTCTTCAAGTTACCCCTCTGTTCAGGTCAACCCCAATCAACAGCAGGACTTTCAAAATGTTGTTTGTTAGTAGATCAACTTCCTTAATAGGGGTGGCCGGTGGGGGTCTTTCAGCAGTAGTTAGTGATCAAGATGGTCATAGAAAGGAACTTCCTTATGAAAACACTTGGAATGGAGTCTCCATCCCTCAACCCAAGTGCCAACCACTCACAGCCGCCGCTTTGCAAAAGAGCCCTCCTACACAGCCTATAATCTGA 1449 0.4141 MQDMKQQKQKQVATEESKKKERHIVTWTQEEDDILREQIGIHGTEKWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNTSYINSNNKRIIFQQGYNTDAASESTVAVKRMRRSHIPDGAEKSNFADRSHKQNGTPINQQSRAPFAVLAQNSHNVNNLPDQPHVCNVKFSGYAQNNKIQGTFLKKDDPKISALMQQAELLSSLALKVDAENMDQSLENAWKVLQEFLNRTKESDIPGYKLPDLQLVDLKDLLEDLKCSSEEIQPCWRHMDLYEDSPGSSENSSGSTILPHCAGDNLEHSLHQDIGTELKSIQIGDQKGVGGCGQMVLSSATLDQNIFPSCEEHMNNDCIVPALSSTEFSSPLQVTPLFRSTPINSRTFKMLFVSRSTSLIGVAGGGLSAVVSDQDGHRKELPYENTWNGVSIPQPKCQPLTAAALQKSPPTQPII 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi583g00029 482 CDD SANT 60 101 IPR001005 -
Sebi583g00029 482 MobiDBLite consensus disorder prediction 1 21 - -
Sebi583g00029 482 MobiDBLite consensus disorder prediction 153 175 - -
Sebi583g00029 482 Pfam Myb-like DNA-binding domain 57 100 IPR001005 -
Sebi583g00029 482 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 106 IPR017930 -
Sebi583g00029 482 SUPERFAMILY Homeodomain-like 45 110 IPR009057 -
Sebi583g00029 482 SMART sant 56 104 IPR001005 -
Sebi583g00029 482 Gene3D - 59 128 - -
Sebi583g00029 482 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Sebi583g00029 482 PANTHER MYB PROTEIN-RELATED 26 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi583g00029 Sebi-Chr583 493682 499654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi583g00029 14 304 MYB Transcription Factor Family AT2G02820 57.325 8.35e-120 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi583g00029 Myb_DNA-binding 1.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi583g00029 K09422 - gmx:100807667 632.869