Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi583g00020 ATGAAGAAAATGAAGAAAGTGAACTTGTCTGCCTCTCTCTTGGGATATCATCTAGCTCCCAAGGCCAACATAGGATGGATATGGAGGAGAAAAAGAATAATAGCAATACAACAACTGAAAACAGAGGAAGATGATGAAGATAAAGGACTTGCACTTGGATTAAATATGATCAGATTTGACCCTGCAGCAGTATCTGATCATCAGATTGAAGCTGCAAATAATCTCAGTCCAGCTGAAAGTAGCCTTGATGATGGCAAAGGGAAGGAAGCAGCTGAGGAACCAACTGAGATGTGGCCACCCAGTAAAGTTTTGAAGACAATCAAAATTGGGGATAAAGTGAAGTTTCTCAACTCAAGAAGGCTGCTAGGGTTTCTATTAGAGCCAGATGTGACTCCTCAAACGATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGAATCCATGCCCGCCGTGCTTACTATCGATGCACTGTCTCTCCATCTTGTCCTGTAAGAAAACAGGGGGTTATCCACAATTCCAATTATATGAGTAACCATAGCATTTCTCAACAGTCTCTGCCAGATTCCATAGTTGCTGCAACCAAGGCAATTACAACCAACCCAAAATTTCAATCAGCATTAGTGACTGCTCTGACAACATATGTTGGCAATGGAGGTGGTAGCACTAGCAATAGCTTAATAGAAAATCATCATGTTCTTGAGAGTGCAGCAGCATTGAAATTAAAGGAAACATTTCTAACCAAAATAACAGAGGAACATGTTCACCATCATCAAGGTACTTGA 798 0.4073 MKKMKKVNLSASLLGYHLAPKANIGWIWRRKRIIAIQQLKTEEDDEDKGLALGLNMIRFDPAAVSDHQIEAANNLSPAESSLDDGKGKEAAEEPTEMWPPSKVLKTIKIGDKVKFLNSRRLLGFLLEPDVTPQTMNDGCQWRKYGQKIAKGIHARRAYYRCTVSPSCPVRKQGVIHNSNYMSNHSISQQSLPDSIVAATKAITTNPKFQSALVTALTTYVGNGGGSTSNSLIENHHVLESAAALKLKETFLTKITEEHVHHHQGT 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi583g00020 265 SUPERFAMILY WRKY DNA-binding domain 131 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi583g00020 265 MobiDBLite consensus disorder prediction 74 97 - -
Sebi583g00020 265 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 125 172 IPR044810 GO:0003700
Sebi583g00020 265 SMART WRKY_cls 135 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi583g00020 265 Pfam WRKY DNA -binding domain 136 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi583g00020 265 ProSiteProfiles WRKY domain profile. 130 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi583g00020 265 Gene3D WRKY domain 127 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi583g00020 Sebi-Chr583 375673 377603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi583g00020 134 172 WRKY Transcription Factor Family AT5G15130 84.615 3.44e-18 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi583g00020 WRKY 8.1e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi583g00020 - - pvu:PHAVU_002G089700g 122.094