Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi583g00019 ATGGAGCATTCTTCTGTAAAATCTGAAGTAAGCCCAACAAGTCATGGGTTGCTCATTGTGGATGGTGAAAGTAATGCTAGTAAGAGTGTCAAAAGGACAGAGAAGAGATTCAAATTCAAGTATGGCAGTATTAAGACAATGGACAGCAATGTGAACAACCACAAGAGCAGCAGCTACAGGGTGACCAATCAACGGCCACCACCACGGGATTCACTTGTTTTATCAGGGGCTTACAATAATGAAGAAGCTGCTGCAAGAGCTTATGATTTGGTTGCGGTCAAGTACTGGGGAACATCAACTTTCACAAATTTCCCTGTATCAATTGAACACAGAGGAATAAATGCAGTGACAAGCTTTGACCTAAGGACTTATATCAGAAGCCTAAGACCAAGTGCTCATTCAACTACTTCTCAAGAACAAAAGCCAAGTATAGATACCCAACCCTTTACAACACCTAACCTTATCCAAACTAGAGAAACCACTAAGGTGTCCAATTTCAACTTCCATCCATTCCCTGGAGGTGAATTGGACAACAACAAAAAGCAAGAAAGTTCCCAGTATATGTCTTTAAGTCCTGGCAATAAATCAGCTTCCTCAACAGCATTAGGACTTCTCCTAAAACCCTCAGTATTCAAAGAAGTGGTGCAGAGAAATTTGAATTTTGTAAATGAAGAAATTGTATTGAAAAACACACAAAAAGGCACTGATGGAGTTGAGGGGATTTTTAATAACGGAAGTACGAGTACCTTTTACATATGCTCTTCCATTAGCAACAACCTACCTAACTTGGAGTCCCCAGAAGAGAGCACATTGCCACTATATCACAGTTCCCTGCAATTCCCCATGGCCCATGGAACAGTACTTTAA 867 0.4072 MEHSSVKSEVSPTSHGLLIVDGESNASKSVKRTEKRFKFKYGSIKTMDSNVNNHKSSSYRVTNQRPPPRDSLVLSGAYNNEEAAARAYDLVAVKYWGTSTFTNFPVSIEHRGINAVTSFDLRTYIRSLRPSAHSTTSQEQKPSIDTQPFTTPNLIQTRETTKVSNFNFHPFPGGELDNNKKQESSQYMSLSPGNKSASSTALGLLLKPSVFKEVVQRNLNFVNEEIVLKNTQKGTDGVEGIFNNGSTSTFYICSSISNNLPNLESPEESTLPLYHSSLQFPMAHGTVL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi583g00019 288 Gene3D AP2/ERF domain 49 108 IPR036955 GO:0003700|GO:0006355
Sebi583g00019 288 MobiDBLite consensus disorder prediction 130 150 - -
Sebi583g00019 288 MobiDBLite consensus disorder prediction 178 192 - -
Sebi583g00019 288 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 72 107 - -
Sebi583g00019 288 SUPERFAMILY DNA-binding domain 54 107 IPR016177 GO:0003677
Sebi583g00019 288 MobiDBLite consensus disorder prediction 171 192 - -
Sebi583g00019 288 ProSiteProfiles AP2/ERF domain profile. 40 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi583g00019 Sebi-Chr583 339715 340730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi583g00019 73 129 AP2-EREBP Transcription Factor Family AT5G17430 49.123 5.03e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi583g00019 - - lja:Lj2g3v1338880.1 223.402