Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi582g00046 ATGGAATCTATGTTTCAAGAAGAAGGGTCCTCTTCTGTAACTTCTTCACCTCTACAATTCTTCTCCATGATGTCACTTTCACCTAGCATAGGATCTCCTTACCCATGGCTTAGAGAACTCAAATCAGAGGAAAGGGGTTTGTACTTGATCCATTTGTTGCTCACTTGTGCAAACCATGTTGCTGCTGGTAGTCTTGAAAATGCAAATGTCACACTTGAGCAAATTTCCCAGCTTGCTTCCCCTGATGGTGATACCATGCAGAGAATTGCTGCATACTTTACTGAAGCACTTGCTGATAGGATACTCAAAACGTGGCCTGGCCTTCACAGGGCCCTCAATTCCACCAGAATAGTTATGGTTTCTGAAGAAATTCTTGTCCAGAAGCTCTTCTTTGAGCTTTTTCCTTTCTTGAAGGTAGCATATATTCTGACAAATCAGGCTATTGTTGAAGCAATGGAAGGGGAGAAAATGGTACATATAATTGATCTCAATGCTGCTGAACCTGCTCAGTGGATTGCTCTCCTCCAAGTTTTGAGTGCACGTCCTGAAGGCACTCCTCATTTGAGAATTACTGGGGTACATCACCAGAAAGAGATTCTGGATCAGATGGCTCATAAGCTTACTGAAGAAGCAGAAAGGTTGGATATCCCATTCCAATTCAATCCTGTAGTTAGCAACCTTGCGGAGAAAATCTCCTCTTTTGTCAAAACATTCAAATGGAATTCACCTGCAAAAGCCCTGCTAATGAACCAAAGCACATTGGGTGATTTGCTTGAAAAAGACATGATTAATGGATATAGCCCAAGTCCTGACTCAGCCTCATCTTCACCAGCATCTTCAACTGCTTCAATGAATTCAGAGAGCTTTCTTAATGCCTTATGGGGATTATCACCAAAGGTCATGGTTGTAACAGAACAAGACTCCAATCATAATGGTTCCACTCTGATGGAGAGGCTGCTGGAAGCACTATATTCTTATGCAGCATTGTTTGATTGTTTGGAATCCACTGTCTCAAGAACATCATTGGAGAGATTAAAGGTGGAGAAGATGCTTTTTGGTGAGGAAATCAAGAACATTATTGCATGTGAGGGAGCTGAAAGAAAGGAAAGACATGAAAAGCTGGATAAGTGGATTCAAAGACTTGATTTATCTGGGTTTGGAAATGTGCCTTTAAGCTATTATGGTATGTTGCAGGCAAGGAGGTTCCTGCAGAGCTATGGTTGTGAGGGATATAGGATGAGGGAAGAAAATGGCTGTGTAGTAATTTGCTGGCAGGATCGGTCCTTGTTTTCAACAACGGCTTGGAGACCTAAGAAGTGA 1320 0.4205 MESMFQEEGSSSVTSSPLQFFSMMSLSPSIGSPYPWLRELKSEERGLYLIHLLLTCANHVAAGSLENANVTLEQISQLASPDGDTMQRIAAYFTEALADRILKTWPGLHRALNSTRIVMVSEEILVQKLFFELFPFLKVAYILTNQAIVEAMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGTPHLRITGVHHQKEILDQMAHKLTEEAERLDIPFQFNPVVSNLAEKISSFVKTFKWNSPAKALLMNQSTLGDLLEKDMINGYSPSPDSASSSPASSTASMNSESFLNALWGLSPKVMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSLERLKVEKMLFGEEIKNIIACEGAERKERHEKLDKWIQRLDLSGFGNVPLSYYGMLQARRFLQSYGCEGYRMREENGCVVICWQDRSLFSTTAWRPKK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi582g00046 439 Pfam GRAS domain family 49 436 IPR005202 -
Sebi582g00046 439 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 432 IPR005202 -
Sebi582g00046 439 ProSiteProfiles GRAS family profile. 40 436 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi582g00046 Sebi-Chr582 580526 581949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi582g00046 1 439 GRAS Transcription Factor Family AT1G50420 64.876 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi582g00046 GRAS 9.4e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi582g00046 - - cave:132164091 697.967