Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi582g00029 ATGGAGGGAATGCAAGCACACCTTGAACTCCGAGATGGTGCTGATATTGGATCCTCTTTATCAAAGCTCATTTTATCAAGTGGGACAAACACCCTTGACTCAATTTTCTCTGATTACCCCTTAACAAATGGTGGCACTACTTCAACTACAACTAATTCCATGTTGGATTACATGGAACCCTTTGGTTCTTCAGCTTTTGAGCCTTTGGGTTCCTCTGTCTACCTTCGCCAAAGAGACATCCTTCAAAAATTCTACCATGAAACTCGGGGAAATGGGTCTTTTGTTCCCACTTCCTTTGCAAATCCATCTCTAAACCCTGTATACACGAGTTCTCTAACCTCTTTCTTGAACCCTAGCAAGAAAAAGCTATACAGGGGAGTGAGACAGAGGCACTGGGGAAAATGGGTCGCTGAAATTAGACTCCCTCAGAATAGGATGAGGGTTTGGTTAGGCACTTACGACACTGCAGAAGCTGCTGCATATGCTTATGATCGTGCAGCTTATAAGCTCCGTGGAGAATATGCACGTTTGAATTTCCCGAATCTGAAGGACCCAAGTAAGTTAGGATTCGGAGATTCAACGAGGTTGAATGCTTTGAAAAGCTCAGTGGATGCAAAAATTCAAGCTATTTGTCAAAAGGTGAAAAGGGAGAAAGCCAAAAAGAGTGCCGCAAAGAAGCTGAATTCAGGGAAGAGTGAGAAATCACAACAGAAGAAGATTAACTCGTCTTCTTGTTCTTCTTCATCATCGTTACCGTTATCACCGCCGTCGATTTTTATGATAATTGGGCGAACGAGTTGTTTTCACCGACTGTTTCAGAGGATGGAGTTTGGAAAGGAGAGAACTCTTTTGGCTCTGTTTCGACAGAATGTCCAACAATGGTAA 885 0.4294 MEGMQAHLELRDGADIGSSLSKLILSSGTNTLDSIFSDYPLTNGGTTSTTTNSMLDYMEPFGSSAFEPLGSSVYLRQRDILQKFYHETRGNGSFVPTSFANPSLNPVYTSSLTSFLNPSKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDSTRLNALKSSVDAKIQAICQKVKREKAKKSAAKKLNSGKSEKSQQKKINSSSCSSSSSLPLSPPSIFMIIGRTSCFHRLFQRMEFGKERTLLALFRQNVQQW 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi582g00029 294 PRINTS Ethylene responsive element binding protein signature 124 135 IPR001471 GO:0003700|GO:0006355
Sebi582g00029 294 PRINTS Ethylene responsive element binding protein signature 146 162 IPR001471 GO:0003700|GO:0006355
Sebi582g00029 294 Pfam AP2 domain 124 173 IPR001471 GO:0003700|GO:0006355
Sebi582g00029 294 ProSiteProfiles AP2/ERF domain profile. 123 180 IPR001471 GO:0003700|GO:0006355
Sebi582g00029 294 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 29 247 - -
Sebi582g00029 294 SMART rav1_2 123 186 IPR001471 GO:0003700|GO:0006355
Sebi582g00029 294 Gene3D AP2/ERF domain 123 181 IPR036955 GO:0003700|GO:0006355
Sebi582g00029 294 MobiDBLite consensus disorder prediction 234 252 - -
Sebi582g00029 294 MobiDBLite consensus disorder prediction 221 252 - -
Sebi582g00029 294 SUPERFAMILY DNA-binding domain 123 180 IPR016177 GO:0003677
Sebi582g00029 294 FunFam Ethylene-responsive transcription factor 2 122 181 - -
Sebi582g00029 294 CDD AP2 122 182 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi582g00029 Sebi-Chr582 388020 388904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi582g00029 14 251 AP2-EREBP Transcription Factor Family AT1G64380 53.232 5.16e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sebi582g00029 AP2 5.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi582g00029 - - gmx:100785364 303.523