Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi582g00024 ATGGAAAATGACACAAGTTGGGAGCAGAAGGCACTCATCAATGAGCTAACTCAGGGGATGGAGACAGCAAGAAAGTTGAAGGCAGACTTGACGTTACCCTCTTCAGTTGACACAAGGGACTTGCTGGTGCAGAAGATATTATCTTCTTATGACAAGGCTTTACTAATTCTAAGATGGAATGCTTCAATTTCCATGTCAACTAAAACTTCCTCACCAGAGTCCCCAGTATCCTTCAACAGAGGGGGCCTCAAGAATCATCAGAAGGCTAAACAAGACTCAAAGAAAAGAAAGATGATGCCCAAATGGATGGATCAAGTTAAAGTGAAGATAGAGAATGGCATTGAAGGACCCTACGAAGATGGCTACAGCTGGAGAAAATATGGACAGAAAGATATTCTGGGTGCAAAATATCCAAGAAACTATTATAGATGCACCTTCCGGAACACAAAGGGCTGCATGGCTACGAAGCAGTTACAGAGATCAGATAAAGATCCCACTATCTTGGACATAACTTACAGAGGAAGCCACACCTGTTCTCAAAGAAACGATGCCGTTCTGCCGCCAAAGTCACCAGAACCGCAAGAGAAAGCGCATGGACAAGAAAGCCTTACAAAGTTGAAAAACACTTTGACTGTCAATACGGAAAACTTGGAAAATGAAGAAACGGCATATCCTTTCACTTCATTAGAATGCATGACACAAGATAACCACACTTTATTTCCTTCTATGCTGCAGGAGAATTATGATCCCTTTTTGAGTAGCATTTCCCAAACGCACTTGTTATCTCCAGAAACACCAGAATCTAAATATTATCTATCTCTGGATGAGTTGGATGGTGTCCCTACAAAGCCAGGCCCAGCAGGTTCTGACATCATTTCCGCCGACACATTGGCCGCCAATTCTCCAATTTTCGATTTTAATTTCTCACTCGATTCAGTGAACATTGATCCAAATTTCCCTTTCAATACCTCGGGATTTTTGTCCTAA 987 0.4205 MENDTSWEQKALINELTQGMETARKLKADLTLPSSVDTRDLLVQKILSSYDKALLILRWNASISMSTKTSSPESPVSFNRGGLKNHQKAKQDSKKRKMMPKWMDQVKVKIENGIEGPYEDGYSWRKYGQKDILGAKYPRNYYRCTFRNTKGCMATKQLQRSDKDPTILDITYRGSHTCSQRNDAVLPPKSPEPQEKAHGQESLTKLKNTLTVNTENLENEETAYPFTSLECMTQDNHTLFPSMLQENYDPFLSSISQTHLLSPETPESKYYLSLDELDGVPTKPGPAGSDIISADTLAANSPIFDFNFSLDSVNIDPNFPFNTSGFLS 328
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi582g00024 328 SUPERFAMILY WRKY DNA-binding domain 117 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi582g00024 328 Gene3D WRKY domain 104 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi582g00024 328 SMART WRKY_cls 118 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi582g00024 328 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 238 IPR044810 GO:0003700
Sebi582g00024 328 MobiDBLite consensus disorder prediction 179 201 - -
Sebi582g00024 328 Pfam WRKY DNA -binding domain 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi582g00024 328 ProSiteProfiles WRKY domain profile. 119 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi582g00024 328 FunFam WRKY transcription factor 53 104 181 - -
Sebi582g00024 328 MobiDBLite consensus disorder prediction 68 98 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi582g00024 Sebi-Chr582 333552 334812 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi582g00024 6 226 WRKY Transcription Factor Family AT4G23810 40.226 2.13e-58 189
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi582g00024 WRKY 1.6e-25 CL0274