Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi582g00016 ATGGAACAGCTCCGGCATATTGGAGAGGTTCTTGGGAGTCTGAAAGCACTCATGGTTTTACGAGATGAAATTCAAATCAATCAACGCCAATGCTGTTTGATCCTTGACACGTTCAGTTTGGCATTTGACACAATTGCAGATGAGATAAAGCAGAACCTGAAGCTGGAGGAGAGGAACACCAAATGGAAACCCTTGGAGTTTCCTCTGAGAGAGCTCTGCAGGGTTTTCAAAGAGGGTGAGCTCTACATCAGGCAATGCTTGGATTCCAAGGAATGGTGGGGGAAAGCAATCACCCTTTCTTTGAATAGAGATTGCGTTGAATTTCACATTCACAACTTGCTCTGTTATTTCCCTGCGGTCATTGAGGCAATTGAGAATGCTGGGGAGGTGTCAGGGCTTGACCAGGATGAGAAGTTGAAGAAGAAACTCATGCTAACGAGGAAGTATGACAATGAATGGAATGACCCCAAACTTTTTCAGTGGAGATTTGGGAAGCAGTATTTGGTTCCTCGCGAGATTTGTGAGCAATTGGAGAATGCTTGGAGGGAGGACAGATGGAGGCTCATAGAAGCACTCAAAGAGAAGAGGTGTTCTGCCAAAGTCACATGTACAAAGAATGAGCAGCACCTTGCTGACTTGCTGTTGAAGAAACTGCTGAATGGATCAGAGAAGACCAACAAGGAGCTGTGGCCAATTGCAGTGCTGTTAGGAGCTAAGGATTATCAGTTGATGAACAAGGACCTGTGGACCTATATGAAGGAGAACTGTGGCCCAAGGAGACAGATTTTGTTCTCTATCCCTGTTGTGGTGGATCTCATGCTTCAGATGGCCAGAGGCATGGAGTACCTCCACTCCAAAAAGATTTACCATGGAGACCTTAACCCTTCTAACATCCTACTCAAAGCCAGGAACTCCCAAGAAGAGAAAGCAGATGCCTATAGCTTTGGGATGATATGCTTTGAGCTCCTGACTGGGAAAGTGCCCTTTGAGGATAACCACCTTCAAGGAGATAGAACGAACCAAAATATCAAAGCAGGGGAGAGACCACTATTCCCATACCGTTCCCCAAAATACCTTGTCAGCTTGATCAAAAAGTGCTGGCAAACTGACCCTGCTCAGCGTCCAACCTTCTCATCTATCTGTAGGATTTTGCGCTACACCAAGAAGTTTCTTTCCATGAACACAGAGTACCAAATCAATACTGAACTCAATCAGCTTGAACTGCAGTCCCCACCTGTGGATTGCTGCGACATAGAAACAATGTTCCTCAAGAGCTTTCCGATGGAGAGGGCATCTAATCTGTCCGCTTTATCACAAATACCATTTGAAATGTTTGCTTATAAAGTTGCTGAGAAAGGGAAGATCAGTCAGAACAATACTAAAGATAAGTGCTCCGAACCGGCAAAGGATGAGCCTTCAGTGTCAAGGGACGAAAATGATGACCAAAACACAGTTTGTGGAGGAGATGAAATTGCATTCATAATGGAAGATCCACTCCCACCAGTAACCAATCCAAGGCCAATTAGTGGTGACACACAGTCTGTTTGTTCCGAAGCCCCGTCCAAGAAAAGTGTTACAATAAAGAAACCAACACAAGTGAAGGCCAAGACAGACCAAGGACCTCCAAAATTGAGAGTAACAAAATCATTACCGCCATCTTTATCTGGTCGCATTTTAAGGATAAATAAGGTGAATCAACCATCAATGGCATCGAGCCCTCTAAGCCCTCGTAGAAGAAGGCCTTCCAATGTCACTGAATCCGAGCGTAATACCAATATCAACAAAGGGAGCCAATCACCCAATTCTATCGGTAATTTTAAGACGAAAAAGTCACAACTAACGTCGAACCTTTCTTCGAGCCCGGCAAGATTGAGACGTGTCAATAGTACTGACACCAATTTGAAGATGCAAAAGGGGTTGATGTCAAGCCATGCGCTGAGAAATTCGAGAACATGCACAAGTAGAAGATGTGGTGGTAATGCCTCGGATTTTGATAGCGGTTTAAAGAAAACAAGAAGTATACTTTCACCGTTGGCATTGAGTCCCTTAAGCCCATATGTGAGAAGAACATGCGGCCATGCCTCAGACACTGAGAGCAGTTTTAATAAGAAAAGAGGAAGCCTGTCACCATTAGCATTGAGCCCTTTGAGCCCATATGTTAGAAGAACGTCTGGTCATCTCTCGGATTAA 2190 0.4452 MEQLRHIGEVLGSLKALMVLRDEIQINQRQCCLILDTFSLAFDTIADEIKQNLKLEERNTKWKPLEFPLRELCRVFKEGELYIRQCLDSKEWWGKAITLSLNRDCVEFHIHNLLCYFPAVIEAIENAGEVSGLDQDEKLKKKLMLTRKYDNEWNDPKLFQWRFGKQYLVPREICEQLENAWREDRWRLIEALKEKRCSAKVTCTKNEQHLADLLLKKLLNGSEKTNKELWPIAVLLGAKDYQLMNKDLWTYMKENCGPRRQILFSIPVVVDLMLQMARGMEYLHSKKIYHGDLNPSNILLKARNSQEEKADAYSFGMICFELLTGKVPFEDNHLQGDRTNQNIKAGERPLFPYRSPKYLVSLIKKCWQTDPAQRPTFSSICRILRYTKKFLSMNTEYQINTELNQLELQSPPVDCCDIETMFLKSFPMERASNLSALSQIPFEMFAYKVAEKGKISQNNTKDKCSEPAKDEPSVSRDENDDQNTVCGGDEIAFIMEDPLPPVTNPRPISGDTQSVCSEAPSKKSVTIKKPTQVKAKTDQGPPKLRVTKSLPPSLSGRILRINKVNQPSMASSPLSPRRRRPSNVTESERNTNINKGSQSPNSIGNFKTKKSQLTSNLSSSPARLRRVNSTDTNLKMQKGLMSSHALRNSRTCTSRRCGGNASDFDSGLKKTRSILSPLALSPLSPYVRRTCGHASDTESSFNKKRGSLSPLALSPLSPYVRRTSGHLSD 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi582g00016 729 MobiDBLite consensus disorder prediction 693 707 - -
Sebi582g00016 729 MobiDBLite consensus disorder prediction 559 634 - -
Sebi582g00016 729 PANTHER SERINE-THREONINE PROTEIN KINASE 266 389 - -
Sebi582g00016 729 SUPERFAMILY Protein kinase-like (PK-like) 242 406 IPR011009 -
Sebi582g00016 729 MobiDBLite consensus disorder prediction 496 634 - -
Sebi582g00016 729 Gene3D Transferase(Phosphotransferase) domain 1 241 304 - -
Sebi582g00016 729 MobiDBLite consensus disorder prediction 506 533 - -
Sebi582g00016 729 Pfam Protein of unknown function (DUF1221) 21 237 IPR010632 -
Sebi582g00016 729 MobiDBLite consensus disorder prediction 456 478 - -
Sebi582g00016 729 Pfam Protein tyrosine and serine/threonine kinase 306 383 IPR001245 GO:0004672|GO:0006468
Sebi582g00016 729 ProSiteProfiles Protein kinase domain profile. 152 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi582g00016 729 MobiDBLite consensus disorder prediction 456 484 - -
Sebi582g00016 729 MobiDBLite consensus disorder prediction 691 729 - -
Sebi582g00016 729 Pfam Protein kinase domain 247 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi582g00016 729 Gene3D Transferase(Phosphotransferase) domain 1 305 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi582g00016 Sebi-Chr582 259679 262463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi582g00016 265 384 MAP Kinase Kinase Kinase AT5G58950 29.630 6.39e-17 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Sebi582g00016 DUF1221 4.6e-102 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi582g00016 - - gmx:100778844 530.406