Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi582g00014 ATGGAATATTTTGCACGCATTTTGTGTTCCATTTACCTGGTGGTGGGTTTCATGGTGTGGCAAGGAAATGCAGAAGCTGTTGAAGACAAGCAAGCTTTGCTAGAGTTTGTGAAAAAGTTGCCTCCTTCTCGGCCTTTGAATTGGAATGAGATGTCTTCAGTGTGTACCAGTTGGACTGGAGTGACTTGTAACGAAGATAAGTCCCGAGTTATAGCTATTCGATTACCAGGGTTTGGATTTCATGGCACCATTCCTTCTGATACAATAAGCCGCATAACGGGGCTGCAAACATTGAGCCTCAGATCCAACTTCATAAGTGGCCATTTTCCTTCTGATTTCTCCAATCTCAAGAACCTTTCTTTTCTCTATCTTCAATTCAACAATTTGACAGGTCCTTTGCCTGACTTCTCTGCTTGGAAGAATCTCTCTGTTGTCAATTTGTCCAATAACCATTTCAGTGGCAGCATTCCTTTTTCCCTTTCCAATTTGACTGAGCTTGTTGGTTTGAATCTTGCAAACAACTCGCTTTCTGGTGAAATCCCTGATCTCAAATTGCCCAGGTTGCAGCAACTGAATTTGTCTAACAACAATTTGCATGGGAGTGTGCCTGTGTCCCTTCAAATGTTTCCTAATGCAGCATTCGTTGGAAACAACATTTCTCTTGGCAGCTCTCCTGTAACACCACCCTCTTCCAAACCTGAGAAACATGGAAGGCTAAGAACTGTAGTGTTGGGGATTATTGTTGCTGGTTCTGTTCTTGGACTTGCAGCATTCCTTGTTTTTGTGATTGTATGCTGCTTGAGAAGGAAGGGTGGAGATGCCTTTGCTGGCAAGTTGCAGAAGGGAGAAATGTCTCCTGAAAAAGTGGTCTCAAGGAGCCTGGATGCAAACAATAAACTTGTTTTCTTTGAGGGTTGTAATTATGCATTTGACTTGGAGGATTTATTAAGGGCTTCTGCTGAGGTGCTGGGTAAGGGAACATTTGGTGCCTCATACAAGGCCGTACTAGAGGATGCAACCACAGTTGTTGTGAAGAGGTTAAAGGAGGTAGCTGTTGGAAAGAAGGATTTTGAGCAACACATGGATATTGTTGGAAGTCTTAAACATGACAATGTGGTTGAGCTAAAGGCATATTACTATTCCAAAGATGAGAAACTGATGGTGTATGATTACTACAGTCAGGGGAGCATCTCTGCTTTGTTGCACGGTAAAAGAGGAGAGGATAGGGTGGCTTTAGGTTGGGATACTCGAATCAAAATAGCTTTAGGTGCTGCACGAGGCCTTGCTCGTATCCATTCTGAGAATAGCGGGAAACTTGTACATGGCAATATCAGATCCTCAAATATCTTTCTCAATGCTAAACAGTATGGTTGTGTATCTGATCTTGGCCTGGCAACCATAATGAGCTCAGTTGCCCTACCGGTGTCACGAGCTGCTGGTTACCGAGCACCTGAAATTACAGACACCAGGAAAGCAACACAATCTTCAGATGTATACAGCTTTGGCGTGGTGTTACTAGAGCTTCTGACTGGGAAATCACCTATCCACACAACTGGTGGGGATGAGATTGTCCACCTTGTGAGATGGGTTCATTCAGTTGTGAGAGAGGAGTGGACAGCTGAAGTATTTGACTTAGAGCTGATAAGATATCCTAACATAGAGGAAGAGATGGTGGAGATGTTACAGATAGCGCTGTCATGCGTGGCAAGGGTGCCTGATCAGAGACCTAAGATGTTAGAAATAGTAAAGATGATAGAAAATGTAAAGCAGATGGATATAGAGAATCAGAATCAGGCATCATCTGAGAACCAAGCTGAAAGTGCAGCACAGGCACAACCCTCTTTAAACACCTCTCAACATGACAGTGACAACTTAGCTTCTGCCCCTTCCTCTAGTCCTCCCCCTATCCAAAACGGAAGTGAATGA 1926 0.4367 MEYFARILCSIYLVVGFMVWQGNAEAVEDKQALLEFVKKLPPSRPLNWNEMSSVCTSWTGVTCNEDKSRVIAIRLPGFGFHGTIPSDTISRITGLQTLSLRSNFISGHFPSDFSNLKNLSFLYLQFNNLTGPLPDFSAWKNLSVVNLSNNHFSGSIPFSLSNLTELVGLNLANNSLSGEIPDLKLPRLQQLNLSNNNLHGSVPVSLQMFPNAAFVGNNISLGSSPVTPPSSKPEKHGRLRTVVLGIIVAGSVLGLAAFLVFVIVCCLRRKGGDAFAGKLQKGEMSPEKVVSRSLDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGASYKAVLEDATTVVVKRLKEVAVGKKDFEQHMDIVGSLKHDNVVELKAYYYSKDEKLMVYDYYSQGSISALLHGKRGEDRVALGWDTRIKIALGAARGLARIHSENSGKLVHGNIRSSNIFLNAKQYGCVSDLGLATIMSSVALPVSRAAGYRAPEITDTRKATQSSDVYSFGVVLLELLTGKSPIHTTGGDEIVHLVRWVHSVVREEWTAEVFDLELIRYPNIEEEMVEMLQIALSCVARVPDQRPKMLEIVKMIENVKQMDIENQNQASSENQAESAAQAQPSLNTSQHDSDNLASAPSSSPPPIQNGSE 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi582g00014 641 SUPERFAMILY Protein kinase-like (PK-like) 321 586 IPR011009 -
Sebi582g00014 641 Pfam Protein kinase domain 320 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi582g00014 641 PANTHER OS05G0588300 PROTEIN 8 601 - -
Sebi582g00014 641 FunFam Probable inactive receptor kinase RLK902 26 184 - -
Sebi582g00014 641 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 392 600 - -
Sebi582g00014 641 SUPERFAMILY L domain-like 39 209 - -
Sebi582g00014 641 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Sebi582g00014 641 Gene3D Ribonuclease Inhibitor 138 226 IPR032675 -
Sebi582g00014 641 FunFam pollen receptor-like kinase 1 286 391 - -
Sebi582g00014 641 Gene3D Phosphorylase Kinase; domain 1 283 391 - -
Sebi582g00014 641 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Sebi582g00014 641 Gene3D Transferase(Phosphotransferase) domain 1 393 614 - -
Sebi582g00014 641 MobiDBLite consensus disorder prediction 596 641 - -
Sebi582g00014 641 ProSiteProfiles Protein kinase domain profile. 317 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi582g00014 Sebi-Chr582 195331 197886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi582g00014 18 614 Receptor kinase-like Gene Family AT4G23740 61.874 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi582g00014 Pkinase 2.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi582g00014 - - gmx:100814524 931.398