Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi582g00008 ATGACTTCCAATGCTACATCTGGAAATGTTTGCTCGCCGCCAATGAAACCCACATCAAATGGTGCATTTCAGGGAGATAACCCTCTTGATTATGCACTTCCCCTGGCTATTTTACAGATATGCCTTGTTCTTGTGGTCACAAGGGGGCTGGCATACCTTCTAAGACCTTTAAGGCAACCGCGAGTTATTGCAGAGATTATTGGAGGAATAATACTTGGCCCATCAGCACTTGGACGGAATAAAAGCTATCTGCATGCAGTTTTCCCACCCAAGAGTCTTACAGTACTAGATACTCTAGCAAACCTAGGCATTATATTCTTTCTATTCCTAGCAGGCCTAGAGTTAGATCCTAAATCTCTGCGGCAAACTGGAGGTAAAGTCCTTGGCATTGCTTTGGCTGGAATAAGCTTACCCTTTGTACTTGGAATTGGTTCATCACTTGTTCTGCAAGGAACAATTGCCAAAGGTGTAGATAGCACTGCATTTCTTGTATACATGGGTGTTGCTCTGTCCATAACTGCATTCCCTGTATTAGCCCGTATTTTGGCCGAGTTGAAACTTCTAACCACTAATGTTGGCAGAATGGCTATGTCAGCTGCAGCAGTTAATGATATAGCTGCATGGATTTTGCTTGCTCTGGCTGTTGCCTTATCAGGCAATAACCAATCTCCAATTGTGTCATTGTGGGTTTTCTTGTGTGGGTGTGGTTTTGTCCTGTGTTCAGTCCTCATTCTGCTTCCAATTTTCAAATGGATGGCCCAACGATGCCATGAAGGGGAGCCAGTTGAAGAGGTATATATATGTGCCACATTAGGTGCTGTTCTGGCTGCTGGGTTCGTTACAGATTCTATTGGAATCCATGCCATGTTTGGCGCTTTTGTTGTTGGAGTTTTGGTCCCAAAAGATGGACCATTTGCCAGTGCTCTTGTGGAGAAAGTAGAGGATCTTGTGTCTGGCCTATTGCTCCCACTCTATTTTGTGTCAAGTGGATTGAAGACTGATATAGCCACCATCCAGGGGCTCCAATCATGGGGTCTTCTAGCTTTCGTTATATTTACTGCTTGTTTTGGGAAGATTGTTGGGACAATTGTAGTATCTCTTCTCTGTAAAGTCCCATTTAATGAGGCTTTAGTGCTGGGATTCTTGATGAATACTAAAGGCTTGGTTGAATTGATTGTCCTTAACATCGGTAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCCATTATGGTTCTCATGGCTCTCTTTACTACCTTCATTACCACTCCTCTTGTGACTGCTGTGTATAAGCCAGCAAGGAAGGCAAGAATAGCAGTGTACAAATACAGAACAATTGAAAGGAAAAACACAAATAGCCAACTGAGGATTCTTGCTTGCTTCCACGGGGCAAGGAATATTCCATCAGTGATAAATTTGATTGAGGCTTCAAGAGGGATCCAGAAGCGTGATGCACTTTGTGTGTATGCAATGCACCTTAAAGAACTCTCTGAGAGATCCTCATCTATACTAATGGTACATAAGGCAAGAAAAAATGGGTTGCCATTCTGGAACAAAGGTCATCATGCAGATTCAAACCATGTTATCGTGGCATTTGAGGCTTACCAGCAACTAAGCCATGTTTCTGTCAGGCCAATGATAGCAATCTCATCTATGGCTAACATTCATGAAGACATTTGTGCAACTGCTGAGAGAAAGAGAGCTGCAATCATTATTCTTCCATTTCATAAGCATCAAAGATTAGATGGTTCACTAGATATTACCCGAAATGATTTTAGATTTGTTAACAAAAGGGTACTTGAACATGCACCATGCTCAGTTGGAATTTTTGTTGATCGTGGGCTTGGTGGTACATGCCATGTATCTGCAAGTAATGTCTCATATTGCATTACTGTGCTTTTCTTTGGTGGTGGTGATGACCGTGAAGCCCTTGCTTATGGAGGTCGAATGGCGGAGCACCCTGGCATAAGATTAGTGGTTATTCGCTTTGTAGTGGAACCTAGGATTGCAGGGGAGATTACGAGAGTTGATGTGGGAGAATCATCTAGCACCAAGTCAATCTCACAGGACGAGGAGTTTCTAGCGGAATTTAAGGTGAAAATAGGCAATGATGACTCCATCATCTATGAAGAGAAGGATAGGGCTACAGTTGTTGCGAAACGCATAGGATTGGGCCTACGACTGGGGATAAGAATAGGTTTAGTGAATCTAGAGTCAATAATCAGGTGCTTCTCTGTGGTGGCGTGTGGACGTGAAGACGAGGACATCCCGAGGAGGTCCAACAAACAGGTTAGCTCTGAAATCTCTGATCCTCCGCCGCCGCCGACGAAGCTGTCGGAGAAACCAACCTCGAGCGGTTTCACGGTGGTTTGCGATGAGGCTCTGAGCGTGACGCAGTTGGTCACTGGAAACGTCCATGGAGATGATGGGGTAGCGTGTTCGGGTCCAGAAGTTGGCGGGTCGGGTTCAAAAATGGTTCTTGCTGCTTTTCTGAAGTTGCTTGTGGTGCTCGTTTTGATCGCAAGTGTGGAGAAGTTCACGGTTGGGATCACCGTGTCAGCGTTTGTGCTTATGTTTATTGAATACGCAAGGGAGCATGTCGTTTTATGTTCCAAAGGGAAAGTGAAAATACTAAAATTTTTAACCAAAGGGATTTTTAGTTGCTTTTGGTTACATACGCTTAAATTGAAGGTAAAGAATGGTTGTGAAGTTCCTGAACCAGAGGGTGACCATGAAGTTGTCTCTGAATTGGCTGTTGGAACTGAATGTGGATCTGATTATTCATCCTTTGAAGAAATTGAGGTTATGGAAACAAAGAGTGAGGTTGGTGTTTGTTCTGAAGAGACTTTACCGGGATTGGGGCTTTTCAATTCCATAAGCTATGGTCAAAGTCAAACGCTGATGTGGAGAGTAGAGGGATTCACTCGTGCTTACAAGAATCGTCACAATTCGGGTGACTCAGAGTTGGACGCTTACAACTCCAATTGGGAATGTGACTTAGCTCAACCTGCTGGCTATAACGGATCCATCGGACTTGCCAAGTTTATGCTATTCTTTGCGTTCCTCACACTTAAAGACTCTTATCCAGCAGCTGCTGCTTCTGATTTTGCCTCTGGTTTGAGTCCGATTCCCTTCTTTGGGGATGTCGGTGACATAAGCACAGGTTTTGCTTCAGCGTTTCTGCTAATATTTTTCTCTGAATTGGGAGACAAGACCTTTTTCATTGCAGCACTGTTAGCAGCTAGGAATTCAGCTGGTGTTGTTTTCATTGGGACGTTTGGCGCACTTGCGGCAATGACTGTCATATCCGTTGTACTTGGACGAACTTTTCATTATGTTGATGAACTCTTGCCATTCAGGTTTGGAGAAACTGATTTACCTATTGATGACATTGCTGCTGTTTGCCTATTGGTATACTTTGGGGTCTCTACCCTACTAGATGCCTCATCTAGTGATGGCCAAAAATCAGATGATGAGCAGAAAGAGGCAGAGCTAGCAGTTTCAGAATTTTCCGGAAATGGTGCTGGGATACTAGCTGCTGCTAGCACAGTTGTTAGCACTTTTCTCTTAGTTTTTGTTGCTGAATGGGGTGATAAATCATTTTTCTCCACAATTGCCCTTGCTGCAGCTTCTTCACCCCTTGGAGTCATAGCTGGATCACTTGCCGGTCATGGTGTTGCAACTTTGCTAGCTGTACTTGGGGGCTCTTTACTGGGGAGTTTTTTGTCAGAGAAGCGGCAACATGTTAGACGTTCCTCTGGATGGACCATATTGAGAAGGAACGTGTTCTTTTACCCTGATAAGATAATAGATGACGTGAAGTTTCCCTGCTGGTTATTGCCTACACAGGAGGCGTTCTCTTTCTCGTCTTTGCTGCAGTAA 3882 0.4395 MTSNATSGNVCSPPMKPTSNGAFQGDNPLDYALPLAILQICLVLVVTRGLAYLLRPLRQPRVIAEIIGGIILGPSALGRNKSYLHAVFPPKSLTVLDTLANLGIIFFLFLAGLELDPKSLRQTGGKVLGIALAGISLPFVLGIGSSLVLQGTIAKGVDSTAFLVYMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDIAAWILLALAVALSGNNQSPIVSLWVFLCGCGFVLCSVLILLPIFKWMAQRCHEGEPVEEVYICATLGAVLAAGFVTDSIGIHAMFGAFVVGVLVPKDGPFASALVEKVEDLVSGLLLPLYFVSSGLKTDIATIQGLQSWGLLAFVIFTACFGKIVGTIVVSLLCKVPFNEALVLGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPLVTAVYKPARKARIAVYKYRTIERKNTNSQLRILACFHGARNIPSVINLIEASRGIQKRDALCVYAMHLKELSERSSSILMVHKARKNGLPFWNKGHHADSNHVIVAFEAYQQLSHVSVRPMIAISSMANIHEDICATAERKRAAIIILPFHKHQRLDGSLDITRNDFRFVNKRVLEHAPCSVGIFVDRGLGGTCHVSASNVSYCITVLFFGGGDDREALAYGGRMAEHPGIRLVVIRFVVEPRIAGEITRVDVGESSSTKSISQDEEFLAEFKVKIGNDDSIIYEEKDRATVVAKRIGLGLRLGIRIGLVNLESIIRCFSVVACGREDEDIPRRSNKQVSSEISDPPPPPTKLSEKPTSSGFTVVCDEALSVTQLVTGNVHGDDGVACSGPEVGGSGSKMVLAAFLKLLVVLVLIASVEKFTVGITVSAFVLMFIEYAREHVVLCSKGKVKILKFLTKGIFSCFWLHTLKLKVKNGCEVPEPEGDHEVVSELAVGTECGSDYSSFEEIEVMETKSEVGVCSEETLPGLGLFNSISYGQSQTLMWRVEGFTRAYKNRHNSGDSELDAYNSNWECDLAQPAGYNGSIGLAKFMLFFAFLTLKDSYPAAAASDFASGLSPIPFFGDVGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFIGTFGALAAMTVISVVLGRTFHYVDELLPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDGQKSDDEQKEAELAVSEFSGNGAGILAAASTVVSTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVATLLAVLGGSLLGSFLSEKRQHVRRSSGWTILRRNVFFYPDKIIDDVKFPCWLLPTQEAFSFSSLLQ 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi582g00008 1293 PANTHER CATION/H + ANTIPORTER 10 713 - -
Sebi582g00008 1293 Pfam Sodium/hydrogen exchanger family 42 427 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi582g00008 1293 Pfam Uncharacterized protein family UPF0016 1186 1246 IPR001727 -
Sebi582g00008 1293 Pfam Uncharacterized protein family UPF0016 1058 1141 IPR001727 -
Sebi582g00008 1293 FunFam Cation/H(+) antiporter 15 35 437 - -
Sebi582g00008 1293 ProSitePatterns Uncharacterized protein family UPF0016 signature. 1067 1076 IPR001727 -
Sebi582g00008 1293 MobiDBLite consensus disorder prediction 758 784 - -
Sebi582g00008 1293 Gene3D - 35 440 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi582g00008 Sebi-Chr582 111966 123878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi582g00008 1 713 Antiporter Super Family AT5G41610 72.184 0.0 1033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi582g00008 K26731 - gmx:100810155 1212.21