Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi582g00005 ATGGAACAGAAAGGCATTTTGATGTCAGCGTTGGGCGTTGGGGTGGGAGTGGGAGTGGGAATTGGCTTGGCTTCTAGACCAAGCGTTAGCAAATGGGGAGCTAATGCTTGTCCATCAAGCGCCATCACTCCGGAGAAGATGGAGCAAGAAATGCTACGACTAATTGTTGATGGCAGAGAAAGCAATGTCACTTTCGATCAATTCCCTTATCATCTCAGTGAGCAGACTCGGGTGTTGCTGACAAGTGCTGCCTATGTCCACTTGAAGCATGCAGAGGTTTCTAGATATACACGGAATCTTGCTCCAGGAAGCCGGACTATTCTGCTCTCAGGGCCAGCAGGTGCTTGCCAAGGCTTAGCTCACTACTTTGAGGCGAAGTTGCTTCTGTTAGATTTAACTGACTTTTCATTGAAGATTCAGAATAAATACGGTTCTGGCAAACAAGAATCTTCTTTCAAAAGGTCTACTTCAGAGTCAACTTTGGAGCGATTATCTGACCTATTTGGGTCATTTTCAATCTTCCCACAGAGGGAAGAGCATAAAGCTTATATAAACCATATCCCTGACCAGAAGCTTTTAGTTGCAGGCAAAATTCCCAGGCAAAGCAGTGGAGTGGACCTTCGATCAATGGAGGCTGACGGATCTTGTAACGCTCCTAAGCTTCGTAGGAATGCGTCTGCCTCTGCAAATATCAGTAGCCTTGGTTTGCAAAGCAACCCTACAAATTCAGCTCCTCTGAAGCACATAACCAGCTGGCCTTTTGATGAAAGGCTTGTTATACAAACTCTTTACAAGATCAGGCCACCAGAAGATGAGTCTCAACTTGTCAGCTGGAAGTCTCAATTTGAAGAGGATATGAAGAGGATACAGATTCAGGATAACAGGAACCATATCATGGAAGTGCTTGCAGCCAACGATCTTGATTGTGATGACCTGGATTGCATCTGTGTAGCAGACACAATGGTTCTCAGTTACTATATAGAAGAGATTGTCATGTCAGCAATTTCTTATCATCTGATGAATAACAACGATCCTGAGTACAGAAATGGGAAACTGGTTATTCCATGCAATAGTTTGTCCCATGCATTGGGTATATTCCAGGATGGGAAATTCAGAGGAAGAGATACCTTAAAATTAGAAGCTCAAGCAGTAACTTCTGAGAGAGAGGAAGGAGCTGTAACTAAACCAGAAGGAAAGTCTGACAATCCTGCTCCTGATACAAAGGCTGAAGCAGAAATACCAGCTTCAGTGGGAAAAGCTGACGGTGAAAATTCAGCTCCTGCATCCAAAGCTGAAGTTCCTCCCGATAATGAGTTTGAGAAGCGAATAAGACCTGAGGTAATACCAGCAAACGAGATTGGTGTAACATTCTCCGATATTGGTGCCTTAGATGATACCAAAGAATCACTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCAGACCTTTTCAAAGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTATTTGGGCCTCCTGGCACCGGAAAGACAATGCTGGCTAAGGCCATTGCAAATGAGGCTGGAGCAAGTTTTATTAACGTTTCCATGTCTACCATAACCTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGTGCTTTATTCACACTGGCAGCAAAGGTCTCCCCAACTATAATATTTGTTGATGAGGTTGATACAACCAATAGGCCGTTTGACCTGGATGAAGCAATTATTAGACGATTTGAAAGGAGGAACTTGTGCATAACTGCTGCCTATAGGCCTGTTAGAGAGTTAATTCAGCAAGAGAGACTAAAGAATTTGAAGGATAAAAAGCAGAAATACGCTGAAGGGCAGAATAATAATGTCCAAGACGTACAAGGAGAACAATTTACAGCAGGAAATACCGAAGACGCCCAGGATGCAGAAGAGGAAGTTGAGCAGGAAAGAGTTATTACTCTTAGGCCTTTGAATATGCAGGACTTCAAAGAGGCAAAGAATCAGGTTGCTGCAAGCTTCGCAGCTGAGGGTGCTGGAATGAGTGAATTAAAGCAATGGAATGATTTGTATGGGGAAGGCGGTTCGAGGAAGCGAGAGCAATTATCTTACTTCCTATAA 2103 0.4356 MEQKGILMSALGVGVGVGVGIGLASRPSVSKWGANACPSSAITPEKMEQEMLRLIVDGRESNVTFDQFPYHLSEQTRVLLTSAAYVHLKHAEVSRYTRNLAPGSRTILLSGPAGACQGLAHYFEAKLLLLDLTDFSLKIQNKYGSGKQESSFKRSTSESTLERLSDLFGSFSIFPQREEHKAYINHIPDQKLLVAGKIPRQSSGVDLRSMEADGSCNAPKLRRNASASANISSLGLQSNPTNSAPLKHITSWPFDERLVIQTLYKIRPPEDESQLVSWKSQFEEDMKRIQIQDNRNHIMEVLAANDLDCDDLDCICVADTMVLSYYIEEIVMSAISYHLMNNNDPEYRNGKLVIPCNSLSHALGIFQDGKFRGRDTLKLEAQAVTSEREEGAVTKPEGKSDNPAPDTKAEAEIPASVGKADGENSAPASKAEVPPDNEFEKRIRPEVIPANEIGVTFSDIGALDDTKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDTTNRPFDLDEAIIRRFERRNLCITAAYRPVRELIQQERLKNLKDKKQKYAEGQNNNVQDVQGEQFTAGNTEDAQDAEEEVEQERVITLRPLNMQDFKEAKNQVAASFAAEGAGMSELKQWNDLYGEGGSRKREQLSYFL 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi582g00005 700 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 580 699 - -
Sebi582g00005 700 SMART AAA_5 491 652 IPR003593 GO:0016887
Sebi582g00005 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 455 607 IPR027417 -
Sebi582g00005 700 Gene3D - 587 664 - -
Sebi582g00005 700 Gene3D - 454 562 IPR027417 -
Sebi582g00005 700 Pfam ATPase family associated with various cellular activities (AAA) 495 562 IPR003959 GO:0005524|GO:0016887
Sebi582g00005 700 MobiDBLite consensus disorder prediction 383 442 - -
Sebi582g00005 700 Gene3D - 563 681 IPR027417 -
Sebi582g00005 700 MobiDBLite consensus disorder prediction 383 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi582g00005 Sebi-Chr582 71803 77419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi582g00005 455 562 Calmodulin-binding Proteins AT3G56690 44.444 1.06e-21 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi582g00005 - - ming:122061800 788.875