Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi581g00014 ATGGCTTCAGATCCAGTTTCAGCAGCACCCTCTTCCTCTACAAACCAATCTATATGTCCTGTATCCATGAATTATGTTTCAACTGTCTCTTGGAACCACTCTACCTGTCTTAACTTCCAACCTTTACCATCCAAACAGGAAACAAGAACAACCACTTGTTGCAAAACTTTGTTGAATCTCTTTGGTATAGCACTTGCAGATAACCTCAAGAAAAACTCTCTTTTCCATCTCCCTAACATCTCTACCTCTATCTCATGCCTTGAGGACTATCAATCAAAGCTCACTTCTCTCTTACTTCCCAATAACCTTGTTTCCTCTTGCTTTGATCCACTTCAATTTGTTATTAGCCCCAATATTTGTGCTAATATTCAAACTAAGCAAGATTGGATCAATAGGGTTGGTCCCTCAAATACAGCACTTGTTGACACTGCTTGTGAACCAGACCTCACTGATTTTGCCCGTTGCCAAGATTGTGTGAATGAAGGGTACAATGTTCAGCAGATGGTGGCACGAATTGATGGTAATGATTCACATTCACAAGATTGTTTTTACTTCACAATACTTTATATTGCTGGAATTGTGAACAAGTTTGGCCCTGAAAGCAAAGGTGTTTTGTCTTGTATTTTGTTGGTTGATTCATTAGCAGTACATTCAGATTCTAGAAAGGGACATCATGCTCTTGTGGGTGGGTTAGTTGGAGCTTCAATTGCATTCCTTTTCATAATAGCTTCTTTGTTAGGATTGTTATTTTGGTACAAAAGGTGGGTGAAGAGAAAAAGTATTGAAAAATTGTTAGCCTCTTTTGAATCACAAGAGGAAACAAGGTCTAGTCAGAGATTGAGACCAAATGCAGGGCTAATTTGGTTCAAGTTTGAGGACCTTGTGAAGGCTACCAACAATTTTTCACCTCAGAACTTTATTGGCAGAGGTGGGTCTGGGTCAGTTTACAAGGGGATTTTACCTGATGGCAAAATGGTTGCTGTTAAAAGGATTGAAGAATCAGATTATCAAGGAGATGCTGAGTTCTATAGAGAAGTGGGGATTGTTAGCAGCTTGAAGCACCGCAATTTGGTGCCATTAAGAGGGTGTTGTGTGGTTGTTGAGCATGAGAGTGCTGAGTACACAGGAAGGTATCTTGTTCTTGATTATATGCCAAATGGTACCCTTAAAGACCATCTCTTTCCAACCATGGACAATGAAAATGAAAAGAAATCATTGACTTGGCCTCAAAGAAGAAGCATAATCTTGGATGTGGCAAATGGGTTGGTTTATTTGCACTTTGGAGTTAAGCCTGCTATTTATCACAGAGATATCAAAGCCACCAATATACTACTTGATGCTGGTATGAGGGCAAGGGTTGCAGATTTTGGGTTAGCCAAACAGAACAGTGAAAATGAAAGTTCTACTAGAAACATAATGGAGAGATTTTTACTGGTTGGAATTCTGTCTTCTCATGTAATTGCTGCTTCAAGGCCAACAATTTTGGATGTTTTGAGGATGTTAGAAGGGGATATTGAGGTTCCACCAATTCCAGATAGGCCAATGTCTCTTGGCCATTACATGTTTCCTAGTGATGATAGTTTTGGGATGAACACAGAATTTGGGTTTGAAGGCTTATCTCGGTTTGAGAATCCATCCTTGAAAAATTGGACTAGAACAAATTGA 1665 0.3946 MASDPVSAAPSSSTNQSICPVSMNYVSTVSWNHSTCLNFQPLPSKQETRTTTCCKTLLNLFGIALADNLKKNSLFHLPNISTSISCLEDYQSKLTSLLLPNNLVSSCFDPLQFVISPNICANIQTKQDWINRVGPSNTALVDTACEPDLTDFARCQDCVNEGYNVQQMVARIDGNDSHSQDCFYFTILYIAGIVNKFGPESKGVLSCILLVDSLAVHSDSRKGHHALVGGLVGASIAFLFIIASLLGLLFWYKRWVKRKSIEKLLASFESQEETRSSQRLRPNAGLIWFKFEDLVKATNNFSPQNFIGRGGSGSVYKGILPDGKMVAVKRIEESDYQGDAEFYREVGIVSSLKHRNLVPLRGCCVVVEHESAEYTGRYLVLDYMPNGTLKDHLFPTMDNENEKKSLTWPQRRSIILDVANGLVYLHFGVKPAIYHRDIKATNILLDAGMRARVADFGLAKQNSENESSTRNIMERFLLVGILSSHVIAASRPTILDVLRMLEGDIEVPPIPDRPMSLGHYMFPSDDSFGMNTEFGFEGLSRFENPSLKNWTRTN 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi581g00014 554 FunFam Receptor-like serine/threonine-protein kinase At4g25390 266 383 - -
Sebi581g00014 554 Gene3D Transferase(Phosphotransferase) domain 1 384 488 - -
Sebi581g00014 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Sebi581g00014 554 ProSiteProfiles Protein kinase domain profile. 301 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi581g00014 554 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Sebi581g00014 554 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 137 473 - -
Sebi581g00014 554 Pfam SPARK 15 183 IPR043891 -
Sebi581g00014 554 SMART serkin_6 301 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi581g00014 554 Gene3D Phosphorylase Kinase; domain 1 262 383 - -
Sebi581g00014 554 Pfam Protein kinase domain 304 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi581g00014 554 SUPERFAMILY Protein kinase-like (PK-like) 279 469 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi581g00014 Sebi-Chr581 125033 126949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi581g00014 444 525 Receptor kinase-like Gene Family AT1G11050 52.439 3.95e-19 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Sebi581g00014 Pkinase 5.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi581g00014 - - vra:106765729 606.29