Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi581g00009 ATGGATGGTGACATTCCCCAAAAGTCTCTAAATAGGGATCAAGATTGCCAAAAGGAACCAATTTTCTTACATGGCGACTTGGATCTGTTGATAATAGAAGCTAAGTCTCTTCCAAATTTAGATTTATCTAGTGAAGCAGTTAGAAAATGTATGACTATGGGTAACATGTGCACACCTCCCTTTGTAAAAGGACTTAAAACACATTCTGGAAAAGATAAGATCATTACTAGTGACCCTTATGTCTCTGTCTGCCTAGCTGGGGCTACCATAGCTCAAACTAGAGTTATTCCTAATTGTGAGAACCCTTTATGGGATGAGCATTTTGTTGTTCCTGTTGCTCACCCTGTTCAAAAAGTGGAGTTTCTTGTTAAGGATAATGATATTCTTGGGGCTGAACTCATTGGAGTAGTGGAGATACCTGTTCAAAAGATACTGCCAGGAAACACTATAAATGATTGGTTTCCCATCATTGGTCAGTATGGAAACTGCTTAAAACCTTATCCTGAGTTGCATATTTCTATTCAGTATAGGGCAATTGGAGCAAATTCTGGAAGTATAAGTGATGGAGATGGGACAACTTGTTTAGGGGTTCCTAAAACATATTTCCCTCTAAGGAAAGGAGGGAGTGTGACTCTATATCAAGATGCACATGTACCAGATGGCATGCTACCTGAAATTCCACTTGAGGGTGGAAAACTATTTCAGCACAATAAATGTTGGGAGGATATATGCCATGCAATTTTGGAAGCTCACCACCTAATATATATTATAGGATGGTCAGTTTTCCACCCAATAAGGCTTGTCAGAGAACCAACAAAACCATTGCCTTCTGGGGGAGAGCTTTCACTTGGAGAGCTGTTGAAATACAAGTCACAAGAAGGGCTCCGAGTGGTTATGTTGATTTGGGATGACAAAACTTCACATGACAAGTTTCTTTTGAAAACAGTTGTGGGGACCCTCTTTACACATCACCAGAAATGTGTGCTTGTAGACACTCAAGCTTCTGGGAATAATCGGAAAATAACAGCTTTTATTGGTGGTCTTGATCTATGTGATGGAAGATATGATACACCTGAGCATCGACTCTTTAGTGATCTAGAGTCAGTTTTTCACAAAGATTTTCATAATCCTACGTTTCAATTAAATTCGCTTGGACCAAGGCAACCATGGCATGACTTACATTGCAAAGTTGAAGGTCCAGCTGCATATGATATATTGACCAATTTTGAACAGAGATGGAGGAAGGCCAAAAAATGGCGCGACTTCAGGCTCAAAAAGGTGACAAATTGGCATGATGATCCATTGCTAAAGCTAGACCGTATTTCATGGATTGTCAATCCATCTTCTGGTCCCAATGGTGATAATGTTGTCCATGTAACCGATGAAAATGATCCTGAGACTTGGCATGTGCAGGTATTTCGGTCCATAGATTCAGGATCTGTGAAGGGATTTCCAAAGGATATTGACAGAGCTAAGGCTCAGGTGCAAATCACTTGA 1497 0.4021 MDGDIPQKSLNRDQDCQKEPIFLHGDLDLLIIEAKSLPNLDLSSEAVRKCMTMGNMCTPPFVKGLKTHSGKDKIITSDPYVSVCLAGATIAQTRVIPNCENPLWDEHFVVPVAHPVQKVEFLVKDNDILGAELIGVVEIPVQKILPGNTINDWFPIIGQYGNCLKPYPELHISIQYRAIGANSGSISDGDGTTCLGVPKTYFPLRKGGSVTLYQDAHVPDGMLPEIPLEGGKLFQHNKCWEDICHAILEAHHLIYIIGWSVFHPIRLVREPTKPLPSGGELSLGELLKYKSQEGLRVVMLIWDDKTSHDKFLLKTVVGTLFTHHQKCVLVDTQASGNNRKITAFIGGLDLCDGRYDTPEHRLFSDLESVFHKDFHNPTFQLNSLGPRQPWHDLHCKVEGPAAYDILTNFEQRWRKAKKWRDFRLKKVTNWHDDPLLKLDRISWIVNPSSGPNGDNVVHVTDENDPETWHVQVFRSIDSGSVKGFPKDIDRAKAQVQIT 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi581g00009 498 SMART C2_3c 26 153 IPR000008 -
Sebi581g00009 498 CDD C2_plant_PLD 20 177 - -
Sebi581g00009 498 Pfam Phospholipase D Active site motif 320 354 IPR001736 GO:0003824
Sebi581g00009 498 Gene3D C2 domain 21 177 IPR035892 -
Sebi581g00009 498 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 23 177 IPR035892 -
Sebi581g00009 498 ProSiteProfiles C2 domain profile. 2 154 IPR000008 -
Sebi581g00009 498 Pfam C2 domain 25 156 IPR000008 -
Sebi581g00009 498 SUPERFAMILY Phospholipase D/nuclease 198 423 - -
Sebi581g00009 498 Gene3D Endonuclease Chain A 230 435 - -
Sebi581g00009 498 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 319 354 IPR001736 GO:0003824
Sebi581g00009 498 PANTHER PHOSPHOLIPASE D 21 311 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi581g00009 Sebi-Chr581 76674 81203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi581g00009 14 494 Phospholipase D Gene Family (Wang group) AT4G35790 51.099 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi581g00009 K01115 - gmx:100779740 878.241