Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi581g00008 ATGTCTATGATGTTCAAGATTGTTGCAGATGCCCTTAAAAAAGCTGGTCTCTCTGATCGGTATCATCCACAAGATTATCTCAATTTTTACTGCCTTGGAAAGAGAGAACCTCAATCCCCAGAATATCAATCAACACAAAATCAATCATCTGAAAATCGTGGCTTGGCATCAGCCAAGAAATTCAGACGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATGAATACGTAATCATTGGATCAGCAAATATTAACCAGAGATCATTGGATGGTTCAAGGGATACAGAAATAGCTATGGGTGCTTATCAACCAAAATATACATGGACAGAAAAGAAATCTCATCCACTTGGCCAGGTGTACGGATACCGGATGTCACTGTGGGCTGAGCACCTTGGTAGTATTGATGGTACTTTTACTGAACCTCACACCCTGGAATGTGTTAGACATGTCAACAAGATTGCCAGACAAAACTGGGAAACATTTGTGGCTGAGGAATGGAATCAGATGAGGGGACACTTGTTGCAGTATCCAGTTTATGTCAGTAGGGATGGAAAAGTCAGTGCACTGAATGGTTGTGAGTGCTTTCCTGATGTTGGAGGCAAAATTCTTGGATCACCCAATTCACTTCCGGATGCACTAACTACTTGA 657 0.4094 MSMMFKIVADALKKAGLSDRYHPQDYLNFYCLGKREPQSPEYQSTQNQSSENRGLASAKKFRRFMIYVHAKGMIVDDEYVIIGSANINQRSLDGSRDTEIAMGAYQPKYTWTEKKSHPLGQVYGYRMSLWAEHLGSIDGTFTEPHTLECVRHVNKIARQNWETFVAEEWNQMRGHLLQYPVYVSRDGKVSALNGCECFPDVGGKILGSPNSLPDALTT 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi581g00008 218 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 64 91 IPR001736 GO:0003824
Sebi581g00008 218 Pfam Phospholipase D Active site motif 65 91 IPR001736 GO:0003824
Sebi581g00008 218 Pfam Phospholipase D C terminal 140 208 IPR024632 -
Sebi581g00008 218 Gene3D Endonuclease Chain A 11 116 - -
Sebi581g00008 218 PANTHER PHOSPHOLIPASE D 1 207 IPR015679 -
Sebi581g00008 218 SMART pld_4 64 91 IPR001736 GO:0003824
Sebi581g00008 218 SUPERFAMILY Phospholipase D/nuclease 60 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi581g00008 Sebi-Chr581 74521 75780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi581g00008 1 217 Phospholipase D Gene Family (Wang group) AT4G00240 58.257 1.80e-86 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi581g00008 K01115 - gmx:100779740 371.318