Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi580g00039 ATGGAGAAACACCAAGTGATATTCCCTACATCATCAGCTGCTTTTCCATTTGATTGTGAAGATGCTTATATTTCTAATGTTCATGAAGAGAAGGAAGACTTTGCAATTTCAGCACAGAAAGAAAGTGACAAAGAGATCAAGCAGCACAGATATGCATTTCAAACAAGGAGTCCAGTTGATGTACTGGACGATGGGTATCAGTGGAGGAAATATGGGAAAAAGATAGTGAAAAACAATAAATTCCCAAGAAGTTACTACAGGTGCTCTCATCGAGGTTGCAATGTCAAGAAACAAATCCAACGTCATTCCCAAGATGAACAGATTGTGGTTACAACCTACGAAGGGATGCATACACACCCTGTGGATAAGTCAGCTGAAAGCTTCGACCAGATCTTAAGAAACCTGCTAGTAAGCAACCTACTCTGTAATGTACCTCCAACGTCGGAATAG 450 0.4044 MEKHQVIFPTSSAAFPFDCEDAYISNVHEEKEDFAISAQKESDKEIKQHRYAFQTRSPVDVLDDGYQWRKYGKKIVKNNKFPRSYYRCSHRGCNVKKQIQRHSQDEQIVVTTYEGMHTHPVDKSAESFDQILRNLLVSNLLCNVPPTSE 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi580g00039 149 Gene3D WRKY domain 39 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi580g00039 149 FunFam WRKY transcription factor 57 48 122 - -
Sebi580g00039 149 SUPERFAMILY WRKY DNA-binding domain 54 121 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi580g00039 149 ProSiteProfiles WRKY domain profile. 57 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi580g00039 149 Pfam WRKY DNA -binding domain 63 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi580g00039 149 SMART WRKY_cls 62 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi580g00039 149 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 124 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi580g00039 Sebi-Chr580 602113 603082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi580g00039 50 137 WRKY Transcription Factor Family AT5G13080 68.182 3.51e-45 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi580g00039 WRKY 4.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi580g00039 - - gmx:100796070 230.72