Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi580g00020 ATGGCTAGTGTGGAAGGGAAATTGAAGACTTTTGTGAGGCACAGATGGGTGGTGTTTGTGTGTGCAATGTGGGATATGTCATTTGCAGGGACAGCTTACATGTTTGGGAGCATATCACCAGTCATAAAGAGCAGCATGGGTTTCAACCAGAAGCAGGTGGCTTTCTTGAGTGTTGCCAAGGATTTGGGTGATAACGTTGGACTTCTGGCTGGGAAAATCAGTGAGGATTGGCCACCTTGGCGAGTTATACTTGTTGGGATCTTCCAGAATGTTGTTGGTTATGGCCTTGTTTGGCTTGTTGTCACCCACAGATTCCCTTCTTTGCCTTTGTGGGCTCTATGCTTTTTTATCTTCCTGGGACAAAATGGATCTACATATTACAACACAGCTGCTCTTGTTTCTTGTGTGCAAAGTTTCCCAGAGAGCAGAGGGCCTGTGGTGGGAATATTGAAGGGCTTTGTTGGCTTAAGTGGTGCAATTTGGACTCAAATTATAGCTATGATCAATGTTCCTGATCAAGCATCTCTGATTTTCATTATAGCAGTTGGACCTGCAATGGTTTCTTGTGCTTTCATGTTCATTATAAGACCTGTTGAAAGTTACCAACAATCTAGAGCTTCTGATGGTTCAGGCTTCATGTTTATCTACAGCATTTGCCTTCTCTTGGCTGCTTATCTTATGGGAGTTTTGCTGCTTGAGAATACACTGGATTTGGACCAAAGCACCATCACTTTATTTGCAGTTATTTTGATCATTCTCATATTGCTTCCAATTATAGTCCCTATTCTATTGGTTTTCTTCTCCAAACCCAAAAATCCTGATGAGGAAACCCTTCTTGAACCACAAATGCCATCATCAACTAAATCCATGCACATGGTTGATGAGACTAGTGTTAGTGCCAAACATGTTGAAAATGAGAAGCCTCCAAAGCTAGAGGTGCTTCCTTTATCAGAAGGGCCAAGGGACATTGTTCAGTTTCATGCTAAACTTTTCCAAGCAGTCACTGCAGCGGTGAAGAAAATCAAGCAACAAAATGGTCCACATAGAGGAGAGGATTTCACCTTAACACAAGCAATGGTGAAGGCTGATTTTTGGATCATGTTCTTCTCTATAGTGATGGGCTGTGGATCAGGCTTGACAATGATAAACAACATGGGTCAGATTTGTCAATCATTGGGAGATGACAATATCAATGTGTATATATCAGTTATCAGCATATCAAACTTCCTTGGTCGTGTTGGTGGTGGCTTCTTCTCAGAGGTTATAGTAAGAAATTTTGCATACCCAAGACTTGTTGCATTGGCAGTGATTCAGGGAATGATGTCTCTGGGACTCTCCTACTATGCCTTGGGATTGGTTGGACAAGTTTACATGGTGGCTATATCTATGGGTTTTGGGTATGGTGCTCACTGGTCAATTACCTTAGCTGCAGCTTCAGAATTATTTGGCTTGAAGAACTTTGGGACTTTATACAATGTTCTTACCATTGCTAGCCCAGTTGGATCTCTGCTTTTATCTGGATTGGTAGCAAGCACATTATATGACTATTATGCAGAGCAGCAAGCAAAGCACAGAATGCAAAGTTTTGGAGCCTCAATGAAATTGGCAATGCCTTTTAACAGTGAAAATAATGAATTGCTTCTATGTGAAGGAAACATATGCTACTCCCTGACATGTGTAATCTTAGCAGTAGTTTGCCTATTTGCAGCTGCTTTGAGCTTGATCATAGTTCACCGGACTAAGAGGTTCTATGCACAACTTTATGTGAAGTCTCTATCTTGA 1782 0.4153 MASVEGKLKTFVRHRWVVFVCAMWDMSFAGTAYMFGSISPVIKSSMGFNQKQVAFLSVAKDLGDNVGLLAGKISEDWPPWRVILVGIFQNVVGYGLVWLVVTHRFPSLPLWALCFFIFLGQNGSTYYNTAALVSCVQSFPESRGPVVGILKGFVGLSGAIWTQIIAMINVPDQASLIFIIAVGPAMVSCAFMFIIRPVESYQQSRASDGSGFMFIYSICLLLAAYLMGVLLLENTLDLDQSTITLFAVILIILILLPIIVPILLVFFSKPKNPDEETLLEPQMPSSTKSMHMVDETSVSAKHVENEKPPKLEVLPLSEGPRDIVQFHAKLFQAVTAAVKKIKQQNGPHRGEDFTLTQAMVKADFWIMFFSIVMGCGSGLTMINNMGQICQSLGDDNINVYISVISISNFLGRVGGGFFSEVIVRNFAYPRLVALAVIQGMMSLGLSYYALGLVGQVYMVAISMGFGYGAHWSITLAAASELFGLKNFGTLYNVLTIASPVGSLLLSGLVASTLYDYYAEQQAKHRMQSFGASMKLAMPFNSENNELLLCEGNICYSLTCVILAVVCLFAAALSLIIVHRTKRFYAQLYVKSLS 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi580g00020 593 Gene3D MFS general substrate transporter like domains 8 208 IPR036259 -
Sebi580g00020 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 585 - -
Sebi580g00020 593 SUPERFAMILY MFS general substrate transporter 209 582 IPR036259 -
Sebi580g00020 593 Gene3D MFS general substrate transporter like domains 364 584 IPR036259 -
Sebi580g00020 593 CDD MFS_Mch1p_like 14 570 - -
Sebi580g00020 593 Pfam Nodulin-like 15 262 IPR010658 -
Sebi580g00020 593 SUPERFAMILY MFS general substrate transporter 8 197 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi580g00020 Sebi-Chr580 363977 366993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi580g00020 2 591 Nodulin-like Gene Family AT5G14120 50.847 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi580g00020 - - gmx:100784744 895.575