Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi580g00009 ATGGCACCTAAATTCTCTACAGACATTTCACTTTTCTCAATCTCCTGGGACTTAGATTTTTGGTGGGCATTATATCCTCCAGGAAAGGTGCCTTTAGGTGTGACAGTACATGTTAATGAAGAAGATGGTGACGTCAATGTTGAGACTCCATCATCACTGCAGTGGTGGCTAGACTTTTATCCTCTTCTTGCTGATGAAGACAAGCCAATTGAGTGTACACAACTACCTGGAGAGACAATTTACGTTCCAAGTGGATGGTGGCACTGCGTTCTAAATTTAGAAACAACTATTGCAGTCACACAGAATTATGTGAATTCCAATAACTTTGAATTTGTATGCTTGGATATGGCACCTGGTTATCATCATAAAGGAGTTTGCCGTGCTGGGTTGCTTGCTCTTGAAGAAAGTTATGAAAATGTCAGACAGAACATGTCATGTAATGAAAAAAACTCAGGTTGTTCCGATTTGTCAAGGAAAGAAAAAAGAGCAAAAACTCAGAAAGATGTAGATGATCTCTATCATGAAAGATCCATAAGTGGTGTATCTAAAAGCTATAATTTATGGAAAGATGGTTTTTCCTATGATATAAATTTCTTATCCATGTTTTTGGATAAGGATAGAGACCATTACAGTGCCCTGTGGAGCTCAGGCAACAGCATTGGCCAACGAGAACTAAGAGAATGGTTATCCAAGCTTTGGATTCAAAAACCAAAAATGAGAGAGCTAATATGGAAGGGAGCATGTATTGCACTAAATGCTGGCAAGTGGTTAGAATGCCTATCAAAAATCTGTGCCTTCCACAATTTGCCCCCTCCCACTGATGATGAAAGGCTTCCTGTTGGTACGGGTAGCAATCCTGTTTATCTAGTGGGGAACTGTGTCGTTAAAATTTTTGTTGAAGGAGGACTGGAAGCTTCACTATATTGTTTAGGCACAGAGCTAGAGTTTTACAGTCTGCTGCATGAAGCCAACTCCCCTCTCAGTAAACATATTCCTAAAGTTTTTGCCAGTGGGATTGTTTATCTTGAAGATGGTTCTTATACCAATTCAAGTTGGGATGGAAAAGGAATCCCTGATGTCATTGCAAAGAGCAATCTTATCAGGAAGAAATGTGACCTTGATGGTTTCTCATTTGGGGTATGGGGCAAGAAACAGTTGGAGTATAGGAATGCTGGGATGCCAGTGAATGGATCAGTTAGTTTACCTGGTCACTCGAGCATATGGCCATATGTGATAACAAAAAGATGTGAAGGGAATATGTTCGCAGAGTTAAGAGACAGATTATCATGGGAAGATACAACAAGCTTGGCCTCCTTTTTGGGAGAGCAGCTGCGCCACCTTCATCTTTTGCCACATCCACCTTTAAATATTTCATTTTTCTCTGATATTGAACACGAATTAAGCTTGTCTGAGGTTAATGGTTGTATTGAAACTTTTAATGGTAAAGCAAATACCGCAGCAGAATGGAGAATCTTCACCAGAACCTTAACAAAGATGAGGAAGGATGTCTCAAGCCGTTTGACCAAGTGGGGAGATCCAATTCCTAGCAAACTGATAGAGAAAATTGATGAATATATCCCACCTGATTTTGCTGAGCTGCTAAATATAACTGAGAATTTCGCAAGCGGTGCTTGTAAACCTTGCTCCTGGATACACACTGACATTATGGATGATAACATTTACATGGAACCATCATCAGTTTGCTCTACCTCCAGTGGGACTGAAGTTACTGCCCTGGTGGGCAATGGTTTGTCAAGTGACTATGAAGAAGTGAAATCCTGGTGTCCTAGTCACATTCTTGATTTCAGCGATCTTTCTATTGGGGATCCTATTTTTGATTTGATACCAATTCATTTAGATGTGTTTAGAGGTGATTTGAATCTTCTTAAGCGAGCTTTAGAAAGTTACAAACTTCCTTTCGCGAGTAACTTATCAAAGGATGAATCAACAGAGAGTGGTCAGAAGTTTAGCCGACTTTCATATGTTGCCATAGCCCAGGCCCCAGCTCCTTCAGAGAATGCAAAGAACCTCTGCCCATTTTACAGCCGAAAGAAAATAACAGAATGCAAAACTGACTTGTGCACCAGCCCCTATCTCCCTATAGTCTTGCACGTGACATACCCCTTTCCCATACTAGCAAACTGTACAGCTCACCCTCCTTATTTTGAACATTTCCCTTCCTACCCCTTCTGGTGCTATTGTATTTTGCATGATGACAATGTCTTGGGAGCTATTTTTAGCATATGGGAAGAACTGAGATCAGCAAAGTCATGGGAAGAAGTTGAGCTGAAAGTGTGGGGGGAGTTGAACAATTACAAAGGCTTTCCTTGA 2331 0.4076 MAPKFSTDISLFSISWDLDFWWALYPPGKVPLGVTVHVNEEDGDVNVETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNYVNSNNFEFVCLDMAPGYHHKGVCRAGLLALEESYENVRQNMSCNEKNSGCSDLSRKEKRAKTQKDVDDLYHERSISGVSKSYNLWKDGFSYDINFLSMFLDKDRDHYSALWSSGNSIGQRELREWLSKLWIQKPKMRELIWKGACIALNAGKWLECLSKICAFHNLPPPTDDERLPVGTGSNPVYLVGNCVVKIFVEGGLEASLYCLGTELEFYSLLHEANSPLSKHIPKVFASGIVYLEDGSYTNSSWDGKGIPDVIAKSNLIRKKCDLDGFSFGVWGKKQLEYRNAGMPVNGSVSLPGHSSIWPYVITKRCEGNMFAELRDRLSWEDTTSLASFLGEQLRHLHLLPHPPLNISFFSDIEHELSLSEVNGCIETFNGKANTAAEWRIFTRTLTKMRKDVSSRLTKWGDPIPSKLIEKIDEYIPPDFAELLNITENFASGACKPCSWIHTDIMDDNIYMEPSSVCSTSSGTEVTALVGNGLSSDYEEVKSWCPSHILDFSDLSIGDPIFDLIPIHLDVFRGDLNLLKRALESYKLPFASNLSKDESTESGQKFSRLSYVAIAQAPAPSENAKNLCPFYSRKKITECKTDLCTSPYLPIVLHVTYPFPILANCTAHPPYFEHFPSYPFWCYCILHDDNVLGAIFSIWEELRSAKSWEEVELKVWGELNNYKGFP 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi580g00009 776 ProSiteProfiles JmjC domain profile. 1 120 IPR003347 -
Sebi580g00009 776 SUPERFAMILY Clavaminate synthase-like 22 113 - -
Sebi580g00009 776 Coils Coil 130 150 - -
Sebi580g00009 776 Gene3D Cupin 21 105 - -
Sebi580g00009 776 Pfam JmjC domain, hydroxylase 64 102 IPR003347 -
Sebi580g00009 776 SUPERFAMILY Protein kinase-like (PK-like) 408 639 IPR011009 -
Sebi580g00009 776 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 22 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi580g00009 Sebi-Chr580 170883 177697 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi580g00009 22 772 Glycosyltransferase AT1G78280 54.425 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Sebi580g00009 Cupin_8 6e-08 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi580g00009 - - gmx:100792541 1140.56