Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi57g00118 ATGGAAGAGGTAATTAATTGTATTCGCCGAGCTTGTGAATTAGCTCAAAACCTTGAATCAGACTTACCCAACTTGGCTAACCAGTCTTCTATGCTGTCCCTATCCATTGATGAGATAGTTGAGACACTGAGTGGTGCAAAAGGAAGGTTATTAAAAATCTACCGACAGGACCAGAAATCAGCATCTTCATCATTTGCTGAGATGGATGCAACGAGTCTAATGCGGGGATGGCTCGGGTGTGGTTACGTGGGTCAGTTGTCTCAAATGCAGCAGCTAATTCAAGTAGTGAGGGGTACCACATCGGATGATGTGCGGATTGGTGAAATGGGAGGGAGAAATGTGGTGGATTCTGAGAGATTGAAAGGATCTGAAGGACGGGTGCTGGTGATTGATCTTGAAGCATCACCCTCACGACCACGAAGATTAAGCAGAAACATTGACCTGGAGAAAAATAAAATGATGGTTCCTGCACCTCAGTTTGGCAACAAAGAGATGCCGCGAGAGGATGGCTTCACTTGGAGAAAATATGGCCAGAAACAGATACTTGGCTCCAAGTACCCAAGGAGTTACTACAGGTGCACATACCAGAAATTATATGAATGCAAAGCCAAGAAGCAAGTGCAGAGACATGATCACAATCATAACATATTCGAGGTAACATACAGAGGGAACCACACTTGCCACATGTCCTCCACAACACCTTCATCATCAGTTCAACCACTGCAACTACTTTTGGAAAGTGGCATTTCCTCATCTTCAGGTAATTCCGGCCGGTGGCTGTCGTCGACGGTGAACCTCAGCCTCCATGCTGATGGCGGTGGTGGCAGTTGTGGGAGTGGTGGAGCCTCCACTACCAGTTCAAGATATGTTGCTGATTATCCTGTGGTGGATATGGCCGATGTTATGTTCAACTCTGCAGGTAGCAGCAGTGGTAACAGTATGGAATCCCTCTTCCCCACTACTGCTGAAGATAAATGGGAACCCAAGGAGAAGAAAAACTGA 1002 0.4631 MEEVINCIRRACELAQNLESDLPNLANQSSMLSLSIDEIVETLSGAKGRLLKIYRQDQKSASSSFAEMDATSLMRGWLGCGYVGQLSQMQQLIQVVRGTTSDDVRIGEMGGRNVVDSERLKGSEGRVLVIDLEASPSRPRRLSRNIDLEKNKMMVPAPQFGNKEMPREDGFTWRKYGQKQILGSKYPRSYYRCTYQKLYECKAKKQVQRHDHNHNIFEVTYRGNHTCHMSSTTPSSSVQPLQLLLESGISSSSGNSGRWLSSTVNLSLHADGGGGSCGSGGASTTSSRYVADYPVVDMADVMFNSAGSSSGNSMESLFPTTAEDKWEPKEKKN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi57g00118 333 Gene3D WRKY domain 157 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi57g00118 333 SUPERFAMILY WRKY DNA-binding domain 165 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi57g00118 333 ProSiteProfiles WRKY domain profile. 162 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi57g00118 333 SMART WRKY_cls 167 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi57g00118 333 MobiDBLite consensus disorder prediction 308 333 - -
Sebi57g00118 333 Pfam WRKY DNA -binding domain 168 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi57g00118 333 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 8 240 IPR044810 GO:0003700
Sebi57g00118 333 Coils Coil 8 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi57g00118 Sebi-Chr57 2333603 2341990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi57g00118 1 319 WRKY Transcription Factor Family AT2G40740 33.728 1.28e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi57g00118 WRKY 3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi57g00118 - - gsj:114410180 333.183