Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi57g00083 ATGGCTTCCTCTTTGTCCAACGGAGACCACAGTGCCGTTCGTTTCCCCTTGTCTCCCTCCACCGCTTTGGTCATTCAGAAAGGTGACATCACCCAATGGTCCATCGATGCTTCCTCCGACGCAATAGTAAATCCAGCAAATGAGAGAATGCTTGGAGGTGGAGGCGCAGACGGAGCCATACATAGGGCTGCTGGTCCAGAACTTCTTGAGGCATGCTACAATGTTCCAGAAGTGCGGCCTGGAATTCGCTGCCCAACAGGGGAAGCAAGGATCACACCGGGTTTTAGATTGCCTGCTTCTCATGTTGTTCATACTGTGGGACCAATCTATGATTCCAACAGTAACCCTGCTGCCTCTCTAGCAAGTGCTTACAGGAATAGTTTGAGGGTTGCAAAAGAGAAAAATATTCAGTATATAGCATTCCCTGCCATATCATGTGGTGTCTTTGGGTAA 453 0.4901 MASSLSNGDHSAVRFPLSPSTALVIQKGDITQWSIDASSDAIVNPANERMLGGGGADGAIHRAAGPELLEACYNVPEVRPGIRCPTGEARITPGFRLPASHVVHTVGPIYDSNSNPAASLASAYRNSLRVAKEKNIQYIAFPAISCGVFG 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi57g00083 150 SMART YBR022w_8 22 150 IPR002589 -
Sebi57g00083 150 Pfam Macro domain 43 150 IPR002589 -
Sebi57g00083 150 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 15 150 - -
Sebi57g00083 150 Gene3D Leucine Aminopeptidase, subunit E, domain 1 3 150 IPR043472 -
Sebi57g00083 150 CDD Macro_OAADPr_deacetylase 23 150 - -
Sebi57g00083 150 ProSiteProfiles Macro domain profile. 10 150 IPR002589 -
Sebi57g00083 150 SUPERFAMILY Macro domain-like 20 150 IPR043472 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi57g00083 28 133 C2H2 Transcription Factor Family AT5G01310 31.933 5.96e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi57g00083 K23518 - qsa:O6P43_020114 257.299