Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi57g00068 ATGGCAATGGTTTCAACAGGCTATCATGCTGTGAAGACTATCTGTGGACGAAGGCAGAGTTGGAGATTGAAAGTGAAGTTGGTGCGAATTTGGAATATGTGCGCTTTAGCAACACCTGAGGATCCATTTGCCACTGAGATGGTTTTAGTAGATGAAGAAGGGGAAACGATAGAGGGCACTATTTTGAAGCAAAACATGAGGAGATTTGCAAATCTGATGGCGGAGGGCCAGGTGTATAAGATAACGAATTTTGGAGTTGTCACAAGCAAAGGAAACTTCAGAGCCTCCCGTCATGACTATAAGATAATGTTCAATGCAAACACAAAGATCACTGCCGTTGCGGCTGCTGTTAATCCACATTTGGGGCTGAATTTACTGATGAGGCTGCTCATTCTTATTTGTAGACTTCATGGGAATTGTATGAGCTTGAACAAGCAAGGCAGGGCCACCCGTTTAATGCTAATAGATATGGTTGATGAAATGGGGACGATAAGGTTCGCTGCTTTTGGGCAACTGATTGATGCAATTCGTGGATTCCTTGTAACCTCTGGGATAGGGCTTCCTGTTGTCATTATTCAGTTAGGCAGGGTTAATCTATATAAGGCTGAGGTAGGGATCCAGAACGTGCACAATGCTACAAAGATTTGGTGGAATCCAGAAATACCTGATGCTGTGGACTTCAAAAATAGCCTCGCAGTTCACGAGATTGAAACCGACGTTGCCATATCCCTTATATCAGACAGGAAACGCCCAATGTCCAAGCGAGATGAATTTCTCAGCTGCTACCCAAGAAAGTCCATAGGCCAATTGCATGAGTTAATTGAGGATGGGTTTTTCATAATATTAGGGACCATCAAAGAGATTGTTGACGATGGCTTGTGGTGGTACATGGCATGTTCTTGCATGAAAGCTGTTAATTATGGTAGAGGGTATCCCTACTGTGATGATTGCCACCGTGCTTACAAGGTGAAGATCTTAGTCTCGGATGGCGAGGACTGTGCACATTTGCTGATGTGGGATTCTGAATGCTACTCCCTTCTCAAGAAATCATGCCGTGAAATGCTTTCGGACCTTAAGGGTGGTGAGTCAGGCCCCTACCCTGATGATATGCTAAGCTGGGTTGACAAGGAAATGTTGTTCCGCATAGAGAGGAAGGGAGAATCAACATTTGGCTATGATGAGTCTTTCCCAGTTAGAAGGATTTGTTTTGACACATCCTTAATTTCTGAGTTCAAGGATATTGCTAACGATGAGACTCCACTTAAGCTTAAGTTTGCTCCTCCTTTTACCAAAGTTCCACCAATTGAGGGCACCAGTAGTGTCATAGATGTCTCCCCTCAATCTATTTGTTCAGCCAGTCCACTTGATGTGTCCCCAATATCGATCGAAAACCCTGCTTCTTCTGCAGCTGAATGCAGCATTTTATCAAAAAGGAGTGGAGGACCTACTCCGGATGAGGATGTTGACAAGACCAGGCTGCCAAGAAAGAAGCACCCACGTGCACCTGTTGCAGATTGGAACAAGTTTGCATTTCTTCTGCTATCGTGCTTCCCTGAGATCCTCGAAGTGGTTGAGGATTCCTTACAATTCCTTTTGTTATCTAGGCCTCTTCTTCCCTGA 1620 0.4444 MAMVSTGYHAVKTICGRRQSWRLKVKLVRIWNMCALATPEDPFATEMVLVDEEGETIEGTILKQNMRRFANLMAEGQVYKITNFGVVTSKGNFRASRHDYKIMFNANTKITAVAAAVNPHLGLNLLMRLLILICRLHGNCMSLNKQGRATRLMLIDMVDEMGTIRFAAFGQLIDAIRGFLVTSGIGLPVVIIQLGRVNLYKAEVGIQNVHNATKIWWNPEIPDAVDFKNSLAVHEIETDVAISLISDRKRPMSKRDEFLSCYPRKSIGQLHELIEDGFFIILGTIKEIVDDGLWWYMACSCMKAVNYGRGYPYCDDCHRAYKVKILVSDGEDCAHLLMWDSECYSLLKKSCREMLSDLKGGESGPYPDDMLSWVDKEMLFRIERKGESTFGYDESFPVRRICFDTSLISEFKDIANDETPLKLKFAPPFTKVPPIEGTSSVIDVSPQSICSASPLDVSPISIENPASSAAECSILSKRSGGPTPDEDVDKTRLPRKKHPRAPVADWNKFAFLLLSCFPEILEVVEDSLQFLLLSRPLLP 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi57g00068 539 Pfam Domain of unknown function DUF223 46 116 IPR003871 -
Sebi57g00068 539 SUPERFAMILY Nucleic acid-binding proteins 144 234 IPR012340 -
Sebi57g00068 539 Gene3D - 130 234 IPR012340 -
Sebi57g00068 539 Gene3D - 259 401 IPR012340 -
Sebi57g00068 539 MobiDBLite consensus disorder prediction 475 499 - -
Sebi57g00068 539 Gene3D - 9 115 IPR012340 -
Sebi57g00068 539 MobiDBLite consensus disorder prediction 482 499 - -
Sebi57g00068 539 SUPERFAMILY Nucleic acid-binding proteins 262 389 IPR012340 -
Sebi57g00068 539 SUPERFAMILY Nucleic acid-binding proteins 9 112 IPR012340 -
Sebi57g00068 539 CDD RPA1_DBD_A_like 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi57g00068 Sebi-Chr57 1070641 1073821 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi57g00068 49 382 Core DNA Replication Machinery Family AT5G61000 24.000 3.79e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi57g00068 - - lja:Lj6g3v0884310.1 281.567