Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi57g00065 ATGTCAAGGATGAGAAACCAAACTGTGGGAAGCCCAAAATCTGGGAAGAACATCTCTGACAACTCTTCAAAAGATCAAGACCAGTTCCTCCCTGTAGCCAACATCAACCGTATCATGAAAAGGGCACTCCCAGCCAATGCCAAAATCTCTAAGGAAGCCAAAGAAAAAGTCCAAGAATGTGTCTCTGAATTCATAAGCTTCATCACTGGTGAAGCATCTGAGAAGTGCCAAAGAGAAAAGAGGAAGACAATTACAGGGGATGATCTTCTTTGGGCTATGACAACCCTGGGATTTGAGAACTATGTTGGACCCTTGAAGGTCTACTTGAACAACTTCAAGGAAAATGAGGGAGAAAAGAGTGATGCTGCTAATACTAATAATCATTCTTCAACAGAAGAGGATGATATTAATGGGGTTGCTGAAATCAACAAAATTGGCTAG 441 0.415 MSRMRNQTVGSPKSGKNISDNSSKDQDQFLPVANINRIMKRALPANAKISKEAKEKVQECVSEFISFITGEASEKCQREKRKTITGDDLLWAMTTLGFENYVGPLKVYLNNFKENEGEKSDAANTNNHSSTEEDDINGVAEINKIG 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi57g00065 146 MobiDBLite consensus disorder prediction 1 26 - -
Sebi57g00065 146 Gene3D Histone, subunit A 15 143 IPR009072 GO:0046982
Sebi57g00065 146 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Sebi57g00065 146 PRINTS CCAAT-binding transcription factor subunit A signature 95 113 - -
Sebi57g00065 146 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Sebi57g00065 146 MobiDBLite consensus disorder prediction 117 146 - -
Sebi57g00065 146 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 29 93 IPR003958 -
Sebi57g00065 146 ProSitePatterns NF-YB/HAP3 subunit signature. 60 76 IPR003956 GO:0005634|GO:0006355|GO:0043565
Sebi57g00065 146 FunFam Nuclear transcription factor Y subunit B-3 18 142 - -
Sebi57g00065 146 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 16 129 IPR027113 GO:0001228|GO:0006355|GO:0016602
Sebi57g00065 146 SUPERFAMILY Histone-fold 26 135 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi57g00065 Sebi-Chr57 1028702 1029142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi57g00065 10 124 CCAAT-HAP3 Transcription Factor Family AT4G14540 73.043 6.51e-59 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Sebi57g00065 CBFD_NFYB_HMF 4.2e-26 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi57g00065 K08065 - gmx:100810059 211.46