Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi57g00062 ATGCCCACCTTCATGAGCGTTGCACCGTTGTTGGTGGTGGTAGTGATGGATCGAACTGATGGCCAACCCACCACTTGTACCGTAGCACGAGTTGGAGGTGTAGTAGTAACACGAACGAAATTCCGAGATCACGCCAAAGCAAGTGATATTAATTCCAAAGCAAGTGATATTGATCCCAAAGCAGATCCTCGAAGTCATCCTTTAAGGCCTTATCTAAACTATATCAGTTCTTGGTACAAACGATTTGGTCCTATTTCTGAACAAGGACGTTGTGTGTTTGCTCAAAGGGATATTTTACAGCCACCCTCACAACTGCTTGAGGATAATATGAAAGCTCTGGCATATCAGAATTTTGAGAAATACCAAACGAAATACACAAAGGTTGTGAAAACTCATGGCTTTGGTTATTGGACGTCGGAAACGACCGAGCTGCTGCATCCGAGCGATGACATGATGGATAATGTGGCAAACGCTTCAAGCTCCCTCCAGGATGGGAAGAGCGAAGGATACAACTTTGTTCAATTTGAATCAGGGGAGTCTACAAATGCTGCTATCGAGAAGCTGAATGGCTCTACTATCAATGATCAGCAGATATATGCTGGGAAAAAATTGTCAAAAATGGATCCCAGCACTTACTCGGCACCCCCTCGTCCTTTATAA 660 0.4409 MPTFMSVAPLLVVVVMDRTDGQPTTCTVARVGGVVVTRTKFRDHAKASDINSKASDIDPKADPRSHPLRPYLNYISSWYKRFGPISEQGRCVFAQRDILQPPSQLLEDNMKALAYQNFEKYQTKYTKVVKTHGFGYWTSETTELLHPSDDMMDNVANASSSLQDGKSEGYNFVQFESGESTNAAIEKLNGSTINDQQIYAGKKLSKMDPSTYSAPPRPL 219
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi57g00062 219 Gene3D - 115 211 IPR012677 -
Sebi57g00062 219 SUPERFAMILY RNA-binding domain, RBD 163 210 IPR035979 GO:0003676
Sebi57g00062 219 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 163 198 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi57g00062 Sebi-Chr57 993598 994554 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi57g00062 150 208 Eukaryotic Initiation Factors Gene Family AT2G36660 44.444 3.14e-10 57.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi57g00062 K13126 K02516 gmx:100804671 70.0922