Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi57g00056 ATGGAGTTTGAATCTGAGGTTGCGGCCTATGAGTTTTATAATGAGTACAGTAGAAGAATTGGGTTTGGTATTCGTCGAAAATATGGAAATAAAAGCAAAAAAGGTGGAATTCTAACTTTAAGAAGGTTCGCATGTTTCAAAGAGGGTAAACGGGGCGTTGACAAACGAGACCATTTGACAAAAGAGCCTAGAGCATAA 198 0.3838 MEFESEVAAYEFYNEYSRRIGFGIRRKYGNKSKKGGILTLRRFACFKEGKRGVDKRDHLTKEPRA 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi57g00056 65 Pfam FAR1 DNA-binding domain 11 64 IPR004330 -
Sebi57g00056 65 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi57g00056 Sebi-Chr57 909772 909969 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi57g00056 FAR1 4e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi57g00056 - K17604 tpra:123896263 111.309