Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi579g00032 ATGTCACCTATGCCCATTCAAATTCTGAGATGGCTGATGCAGCCTTTAGTGTGGAGATTTGTGGGCTTTGGTTCAGCTGTTGTTGGGCTGCTTTGTTACGCTCTCAGCTCTTCCTTCAACCATCTATTTGGAAACTGGAATTTGATCAAAATATTTCTTTACACCGCTTTCAGTTTCATCATCAGTCTCTTGATTTTCTATGCAAAGAAATGGCAGCACTCCACAAGTCTCCGGTTCAAAGCTCATTCAGCATTTTTGGTTTTGACTATCACCTCAGTCTATTCCTTTTTCTACGATAAAGTAGTTAACGGAAAACCAGATGCATATAGTCTCATTTCCTGTTCTGCGTTTTCTATCATGACACTCAGCTTGTCAAGGCAAACACGGTGTGGATTCGAAGTGGATCTTCTCTATTTCTTTCTTGGATGTCTAAACGTACAACTCATGAAGATAAAATTGCCGTTAGCTATTCTTGGAGCAGGTTTCAGCTACTCCCTCATTATTCTCCGTTCTTACTTTTCTTCCCTAAATTCCACCGTAGAAATCGAGCATCTTGGACTCCAAGATCAACGCCTGGTCATTCAGGTCGATTCATCACAACAACTCGCCAACACTGATACTGGTAAACTCAAGCAACAGTTCATGAATTGCGTGGAGGAGCTTCGGAAGAACAATTCGAATCTCACCAACATGCTTTTGCAGCGGGTGAAGAAGTACCTTAACGGTAACACTGAATTGGTAGTGACCGACCACAATTTCATGATTGATGTGCTGCCGCGGGAAACGATGAACAACCTTCATGAAACTGCGAAGTTGATGCTGAACGCTGGGCTTCAGAAAGAGTGCTCCGAAGTGTACAGTACTTGGCGAAAGGAATGGTTGGAAGAGTGTCTAATAAATAAATTATTTAGGATGCGAAAGATTGGATTTCAAGATTACATGATTGGAAGATGGATTAAAACATTCAAAGTCTCTCTCAGGATACTGTTTCCCAGTGAGCGAAGACTCTGCAATCATGTCTTCATGGGATTCTCCTCCACCGCTGATCTCTGTTTCTTAGAGGTTTGCCATGGAGCAGCGATTCAGTTATTGAATTATGCTGATGCGTTTGTGACTCGGAGTCCTTCAGCTTGGCTTTTGTTTCAAACCCTTGACATGTTTGACACATTGCGTGAAATGATTCCCGACTTTGAATCGTTGTTTCCTGATTCGTTGGTGAACGAAGCAATTAGAATCCAGAATAGATTGGGAGAAGCAAGTAGGGACATTTTCATGGAATTTGGGAATCTGATTTTTCATACGCCGGATGCGGAGTTTGATGCTTGGGACGATGGCAGGGTTCATCCAATGACCTGCGTTGGCTCGGGCTATCTCGTCAATGCTTTCTGGTCAAGGCTTATGCTGGAGAAAATTTTAAGAGAATACCCCAAGGTTGGTGATGGAGGAGCGACATCTTCATTCTCTGTGCTGATGGAGAGAATAATGGAGCAGATTGAGAGAAAATTGGAAGCTAAGTCCAAAATTTACAAAGACCCTGCTTTACGCTGTTTTTTCATGATGAATAATTTGAGGCACATTGAGTACCAATTGGGAACCTTGTGGAGGGATGAAAGGTTCCAAGCAAACACAGGGCGATACCTTGAACTTTATCATAGAAGCTCATGGAATAAGGTGCTAGATATTTTAAATCTGGACAGCAACAACAATGAATCAGTGGCGTCCAATGTTGCAGTAGAGTCAATGAAAGACAAGCTCAATTTGTTCAACCTGCGCTTTAGGGAGGTGTACAGTGTTCAATCAACATGGCTTGTCTTTGATAAGGTGCTAAGGAAACAAATAATAGTATATGTGGAAAACATGTTGTTGCCAGCATATGCAAACTTCATTGGGAGGTTCCATCATGTTCTCGGTGAGCATGCTGATGAGTATATTGAGTATGGAATGTCTGACATTCAAGATCGACTCAACCATTTGTTTATTGGAAACGAGATGATGAATCAACATTCAATAGTAGCTGACAGAGAAGGAAAGGATTTGTGGCAATATCCTATGTGCACCTATAAAGAAGTGAATGGAAAACCAGACCTACTGAGTCTGATTTCTTGTGCAGCGTTTGCTTTAATGTCTGTGTGCTTGTCAAGGCAGATTGACCTTGGATTTGGAGCAGATCTCCTCAATTTCTTCCTTGGATATTTCACTGTTCAACTGATGAAGATTAACTTGATGCTCTCTATAGTTGCAGCCATCCTCTGCTATTCTCTCATGGTGCTACGTTCAAAAATGGATTCTCAATCAGAGATTGGGACTCAAGGATTGGAACACCGTGTAGACATAAAAATTGATGCTGCAGACGAAGGAGATAGAGGAGCTGATCACAACAGAAGTCACTTCCAAGGCCAACAAATTGAGTCACTAAGAAGAAGAATGGTGGTGAAAGATGAGTATGACACTGATTATAACAATGGCCGCAGACAAATTCATCATTCCTTAAGAAGCAGAATGGTGGATGACGGGTACAATTTGAAAAAATATGAAGAGAAACAAGTGAAAAAGAATGAAAATCTGAGAAGCTACTTCAAATGCGCGAGTCCCAGGTGCCCTGTAAGGAAAAAAATTGAGACAAGTATAGATGGGGAAATTATTGAGACACAATACAAGGGTAACCATAACCATTGCAAGCCTAAGTTTACACTAAAAAGTAACTCATCATCTGAATATCTTTATTCACTTTTACCTTCAGAGCCTGTCGTCCCCACTGACATGCCGGATCAATCATTTGCTTCCCACGGCGGTGAACAATTGGATGGTGATGCAACACCAGAAAACTCCACGGTATCAATATGA 2844 0.4156 MSPMPIQILRWLMQPLVWRFVGFGSAVVGLLCYALSSSFNHLFGNWNLIKIFLYTAFSFIISLLIFYAKKWQHSTSLRFKAHSAFLVLTITSVYSFFYDKVVNGKPDAYSLISCSAFSIMTLSLSRQTRCGFEVDLLYFFLGCLNVQLMKIKLPLAILGAGFSYSLIILRSYFSSLNSTVEIEHLGLQDQRLVIQVDSSQQLANTDTGKLKQQFMNCVEELRKNNSNLTNMLLQRVKKYLNGNTELVVTDHNFMIDVLPRETMNNLHETAKLMLNAGLQKECSEVYSTWRKEWLEECLINKLFRMRKIGFQDYMIGRWIKTFKVSLRILFPSERRLCNHVFMGFSSTADLCFLEVCHGAAIQLLNYADAFVTRSPSAWLLFQTLDMFDTLREMIPDFESLFPDSLVNEAIRIQNRLGEASRDIFMEFGNLIFHTPDAEFDAWDDGRVHPMTCVGSGYLVNAFWSRLMLEKILREYPKVGDGGATSSFSVLMERIMEQIERKLEAKSKIYKDPALRCFFMMNNLRHIEYQLGTLWRDERFQANTGRYLELYHRSSWNKVLDILNLDSNNNESVASNVAVESMKDKLNLFNLRFREVYSVQSTWLVFDKVLRKQIIVYVENMLLPAYANFIGRFHHVLGEHADEYIEYGMSDIQDRLNHLFIGNEMMNQHSIVADREGKDLWQYPMCTYKEVNGKPDLLSLISCAAFALMSVCLSRQIDLGFGADLLNFFLGYFTVQLMKINLMLSIVAAILCYSLMVLRSKMDSQSEIGTQGLEHRVDIKIDAADEGDRGADHNRSHFQGQQIESLRRRMVVKDEYDTDYNNGRRQIHHSLRSRMVDDGYNLKKYEEKQVKKNENLRSYFKCASPRCPVRKKIETSIDGEIIETQYKGNHNHCKPKFTLKSNSSSEYLYSLLPSEPVVPTDMPDQSFASHGGEQLDGDATPENSTVSI 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi579g00032 947 Gene3D WRKY domain 820 895 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi579g00032 947 PANTHER EXOCYST COMPLEX PROTEIN EXO70 197 659 IPR004140 GO:0000145|GO:0006887
Sebi579g00032 947 Pfam Exo70 exocyst complex subunit 317 656 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi579g00032 947 SUPERFAMILY WRKY DNA-binding domain 830 894 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi579g00032 947 SUPERFAMILY Cullin repeat-like 212 659 IPR016159 -
Sebi579g00032 947 ProSiteProfiles WRKY domain profile. 830 894 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi579g00032 947 Pfam WRKY DNA -binding domain 836 891 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi579g00032 947 MobiDBLite consensus disorder prediction 918 947 - -
Sebi579g00032 947 Gene3D Exocyst complex component Exo70 194 668 - -
Sebi579g00032 947 SMART WRKY_cls 835 893 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi579g00032 Sebi-Chr579 593100 597166 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi579g00032 248 662 EXO70 exocyst subunit family AT5G58430 44.521 1.03e-105 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi579g00032 Exo70 2.8e-70 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi579g00032 - - psat:127118474 796.964