Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi579g00029 ATGGATAACAACAAACCCCCTTATGTAACTTCAACACCAAACTTGAACGTGAAATCAAAACGATCACCATCGTCATCATCATTGTGTCCTAAACCACAAGTTTCAACCACCACCTCAAACTTTGGTTGCTTTAACCATGACATTCGTGAGTTGCCTAATAATTATCTAAGAAATATAGGCCACAAGCACAACCAGTCCGATATTCTCACCCTCCTTGATGATTTTAGAATCGACGATTATCTTGGCACCATGGATGGTCACTCCTTCTCAAGTGGCACCATTGAGAAAGACTCGCTCTCCACCTATCTGGATGTGGATAAACTAAACCCATCCCCTGGTGCCCTTGCAACTGATGTAGACAACTTTTCTATTGCTATTGGTAGTACCAATATCAATGAAAGAATTGACGTTGGGTCCCAACATAGCCTATTTATGAATGGTTCAACATCCATAATCAAACCTGATGTGTTGGTCTCTGCTTCTGAAAATGGACCTACTATTAACTCGAAAGAAGCAGTGTCTCCTTTTTCAATTGGTACTTGCGTCGAGGATGATCTTGGTACCATGAGTGGTCACTCACTTTATGATGATACCATTGGGAATGACTTGCTCTCCACCTTCTTCAATATGGATAAACCAAACCCATCCTCCGGTGCTCCTGCATCTACTGCAGATAACGTTGTTGTTGCTAGTGGTACTACCAATATCAATGAAAGGCTTAACGTTGGGTCCCAACATAGCCAATCTATGAATGGTTCAACATCCATCATCAACCCTGACATATTGGTATCTGCTTATGAAATTGGCTCTACTATGAACACAAGAAAAGCAATGTCTGCTTTTTCTATTGGTACTTGCATCAACGATGATCTTGGCATCATGGATAGTCACTCACTCTCCAATGGCACCATTGATGAACACTTGCGCTCCACCTACCTCAATATGGATAAAATAAACCCATCCTCTGGTGCCCTTGCATCTGCTACATATAACTTTTCTATTTCTATTGGTACTACCAATATGAATGAAAGGCTTGATGTTGGGTCCCAAGATAGCCAGTTTATGAATGGTTCAACATCCATAATCAAATCGGACATGCTGGTCTCTGCTTTTGATAATGGCTCTACCATTAACTCAAAACAAACAGCGTCTGCTTTTTCTATTGGTACTTGGGTCGATGATGATCTTGGGACCATGGATGGTCACTCACTCTATGATGATACCACTAACAAGGACATGCTCTCCACTTACCTCAATATAGATAAACTAAACCCATCCTCTTGTGATCCTGCATCTACTGCAAACAACTTTGCTATTGCTAGTGGTACTACCAATATCAATGAAAGGCCTGGCGTTGGGTCCCATCATAGCCAATTTATGAATGGTTCAACATCCATCATCAAACCTAACATGTTGGTCTCTGCTTCTGAAAATGGATCTACTATTAACTCAAGAAAATCAAAGTCTGCTACTGAGCTTGCGGAGCTTGCCTTGGTTGACCCCAAGCGTGCTAAAAGGATTTTGGCAAATAGACAGTCTGCTATAAGATCAAAGGAAAAGCAGGCGCATTACATTTTGGAGCTTGAAAAGAAGGTGCAAACATTGGAAACTGAAAAGGCATCCCTATCTACACAGTTAACAATCTCGCAAGTATGTCTTAACTCATCATTTGCATCTTATGTGTCTGTTAACTTGGGACTGTTGTTTACATGTGTTTGA 1719 0.4101 MDNNKPPYVTSTPNLNVKSKRSPSSSSLCPKPQVSTTTSNFGCFNHDIRELPNNYLRNIGHKHNQSDILTLLDDFRIDDYLGTMDGHSFSSGTIEKDSLSTYLDVDKLNPSPGALATDVDNFSIAIGSTNINERIDVGSQHSLFMNGSTSIIKPDVLVSASENGPTINSKEAVSPFSIGTCVEDDLGTMSGHSLYDDTIGNDLLSTFFNMDKPNPSSGAPASTADNVVVASGTTNINERLNVGSQHSQSMNGSTSIINPDILVSAYEIGSTMNTRKAMSAFSIGTCINDDLGIMDSHSLSNGTIDEHLRSTYLNMDKINPSSGALASATYNFSISIGTTNMNERLDVGSQDSQFMNGSTSIIKSDMLVSAFDNGSTINSKQTASAFSIGTWVDDDLGTMDGHSLYDDTTNKDMLSTYLNIDKLNPSSCDPASTANNFAIASGTTNINERPGVGSHHSQFMNGSTSIIKPNMLVSASENGSTINSRKSKSATELAELALVDPKRAKRILANRQSAIRSKEKQAHYILELEKKVQTLETEKASLSTQLTISQVCLNSSFASYVSVNLGLLFTCV 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi579g00029 572 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 270 550 - -
Sebi579g00029 572 MobiDBLite consensus disorder prediction 1 36 - -
Sebi579g00029 572 Gene3D - 501 554 - -
Sebi579g00029 572 SMART brlzneu 498 566 IPR004827 GO:0003700|GO:0006355
Sebi579g00029 572 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 500 546 IPR004827 GO:0003700|GO:0006355
Sebi579g00029 572 Pfam bZIP transcription factor 502 546 IPR004827 GO:0003700|GO:0006355
Sebi579g00029 572 Coils Coil 525 545 - -
Sebi579g00029 572 CDD bZIP_plant_RF2 503 550 IPR044759 GO:0003700|GO:0006355
Sebi579g00029 572 SUPERFAMILY Leucine zipper domain 502 549 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi579g00029 Sebi-Chr579 576930 578829 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi579g00029 393 550 bZIP Transcription Factor Family AT2G31370 48.333 2.33e-38 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi579g00029 bZIP_1 5.2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi579g00029 - - csin:114307154 150.984