Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi579g00028 ATGGTGCCTATGCTCATCCAAATTCAGAGATGGCTGATGCAGCCTTTCATATGGAGATTTGTGGGCTTTGGTTCAGCTGTTGTTGGACTACTTTGTTACGCTCTGAGCTCTTCCTTCAACCATCTATTTGGAAACTGGAATTTGATTAAAATATTTCTTTACACTGCTTTTAGTTTCATCATCAGTCTCTTGATTTTGTATGCAGAGAAATGGCAGCACTCGAGAAGTCTCCGATTCAAAGCTCATTCAGCATTTTTGGTTTTGACCATCACATCGGTCTTTTCCTTTTTCTCCGATAAAGTGATGAATGGAAAACCAGATGCATATAGCCTCATTTCATGTGCTGCCTTTGCTATCATGTCACTAAGCTTGTCAAGGCAAACACAGTGCGGATTCGAAGTGGATCTTCTCTATTTCTTTCTTGGATGTCTAACAGTGCAACTCATGAAGATTAAATTGGAGTTAGCTATTGTTGGAGCAGGTTTCAGTTATTCCCTTATTATTCTTCGTTCATCCCTTTCTACCTTAGATGCCGCACCAGAAAACGAATATGCTGGAGGTGGACTCCAAGATCAACATTCAGTAGTCATTGAAGTCCATTCACCACATGTGGCCACTAGTAATATTGATATTACCAGTATGATGCAACAACTCAGGACTTGTGTGGAGGCTCTTCATAAGGAAGATTCGAAACTCATCGACATGCTTCTGAACGAGGTGAAGGAATACCTTGAAGGCACTGAATCTGAATTATTGGTGACTGACCATAACTTCGTGATTGATGCGTTGCCATCAGGAAGGATCAACGATCTTCAACAAACGGTGAAGATATTGGTAGGCGCTGGATTTGAGAAGGAGTGTTCTCATATGTTCAGCAATTGGCGGAGGGAATGGTTGGAGGAATGCCTAATTGATAAGTTACTAGCCTCGCAAGAAATCAGCATTCTGAACGAGAAAGAGCAAGAAAGAAAAGCATTTGTAAATAAAATGATAACAAGATGGAATAAAGCTTCAAAAATCGCTCTCAAGATACTATTCCCCAGTGAGCGACGACTCTGTGATCGTGTCTTTTCGGGGTTCTCTTCTGCTGCTGAACGTTGTTTCACAGAGGTTTGCAGGGGATCTGCGTTTCAACTGCTTAATTTTGTCGATGTTATTGCTGATGAGAGTCCCACGGTGTGGCATTTTTTCAACGTCCTCCACGTGTTTGAGGGATTGCGTGATTTAATTACGGAATTCCAATCAATGTTTCCTAATTCGTTGGTAAATGAAGCAATCAAAGTCCAGAACAGGTTAGGAGAAGCAAGCAGAGAACTTTTCTTGGATTTCGATAATCTGATTTTCCGTGTCCCTGAGGAGAAGGAACTTGCTCCGGCAGATGGCTGGCGTCATCCAATGATATCCATTGTCATGAACTCCCTCTTTTCTGCTTGCAGGTCACGACAGACCCTAGAGCAAATTTTACAAGAATACCCCAAGGTGTCTAATGGAGCGGGAACATCTCCTTCATTTATAGGGCAAATGGAGCGGATCATGGAGCTGTTAGAGAGAAAATTGATAGCTAAGTCCAAAATATACAAGGACCCTGCTTTGCGCTATTTTTTCATGATGAATAATCGCAGGTGCATAGAAACTGTGAATGAAAGATGGGCATTGGGAACAATTTTTGGTGATGACTGGTTCCGGAATAACAGAGGAAAAATCCAACAAAACCTTGAGCTCTATCAAAGAAGCTCGTGGGATAAGGTGCTAGACTTTTTGAAAGTGGATAGCGATGAGTCTGTGTCGCCGAATGTTGCAGTAGATTCAATGAAAGACAAGCTCAATTTGTTTAATCTACACTTTGAGCAGATATGCAGCGTTCAATCTACATGGTGTGTCTCTAATAAGAAGCTACGGGGACAAATAATAACATCCTTGGAAAACATCTTGTTGCCAGCGTATGAAAACTTCGTGGGGAGGTTACAAAATGTTCTTGGTAAGCATGCTGATGAATATATTGAGTATGGGATGTTTGACATTCAAGATCGACTCAACCATTTGTTCCAGGGTGAAATCATAATACAAAATTTATTACAAACATTATTCTAA 2091 0.4103 MVPMLIQIQRWLMQPFIWRFVGFGSAVVGLLCYALSSSFNHLFGNWNLIKIFLYTAFSFIISLLILYAEKWQHSRSLRFKAHSAFLVLTITSVFSFFSDKVMNGKPDAYSLISCAAFAIMSLSLSRQTQCGFEVDLLYFFLGCLTVQLMKIKLELAIVGAGFSYSLIILRSSLSTLDAAPENEYAGGGLQDQHSVVIEVHSPHVATSNIDITSMMQQLRTCVEALHKEDSKLIDMLLNEVKEYLEGTESELLVTDHNFVIDALPSGRINDLQQTVKILVGAGFEKECSHMFSNWRREWLEECLIDKLLASQEISILNEKEQERKAFVNKMITRWNKASKIALKILFPSERRLCDRVFSGFSSAAERCFTEVCRGSAFQLLNFVDVIADESPTVWHFFNVLHVFEGLRDLITEFQSMFPNSLVNEAIKVQNRLGEASRELFLDFDNLIFRVPEEKELAPADGWRHPMISIVMNSLFSACRSRQTLEQILQEYPKVSNGAGTSPSFIGQMERIMELLERKLIAKSKIYKDPALRYFFMMNNRRCIETVNERWALGTIFGDDWFRNNRGKIQQNLELYQRSSWDKVLDFLKVDSDESVSPNVAVDSMKDKLNLFNLHFEQICSVQSTWCVSNKKLRGQIITSLENILLPAYENFVGRLQNVLGKHADEYIEYGMFDIQDRLNHLFQGEIIIQNLLQTLF 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi579g00028 696 Pfam Exo70 exocyst complex subunit 332 679 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi579g00028 696 Gene3D Exocyst complex component Exo70 203 687 - -
Sebi579g00028 696 SUPERFAMILY Cullin repeat-like 235 682 IPR016159 -
Sebi579g00028 696 PANTHER EXOCYST COMPLEX PROTEIN EXO70 141 684 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi579g00028 Sebi-Chr579 484812 486902 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi579g00028 253 684 EXO70 exocyst subunit family AT5G58430 49.091 6.32e-121 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi579g00028 - - gmx:100788866 701.049