Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi579g00025 ATGCTCACCCAGATTTTCAGATGGCTGATGCAATCAGAGGTATGGAGATTTATAGGCTTTGGTTCAGCTGTTGTTGGACTGCTTTGTTACGCACTCAGCTCTTCCCTCAACCACATATTTGGACCGTGGACTGTGTTAAAGATATTTCTTTACAGTGTTTTCAGTTTCACCATCTGCCTCGTTATTTTATTTGCAAAAACATGGCAACGCTCGAGAAGTCTCCGATTCAAAGCTCATTCGGCATTATTGGTTTTGACCATCACCTCAGTCTATTCCTTTTTCTCCGATAAAGTAATGAATGGGAAACCAGATGCCTATAGCCTGATTTCAAGTGCTGCCTTTGCCACCATGTCACTCAGTTTATCGAGGCAAACACAGTGCGGATTTGAAGCGGATCTTTTATATTTCTTTCTCGGATGCCTACTCGTCCAACTCATGAAGATTAAATTGCAGTTAGTTATTGTTGGAGTGGGTTTCAGCTATTCCCTTATTATTGTTCGCTCTTCCTTTTCATCCATAGATGCCGCACCACAAAATGAGTATGTGAGCCTTCAAGATGAACATTTTGTAGCCGTTCAAGTCGATTCACCACAACTACCAATTAGTACTGATATTGCTAGTATGATGCAACAGCTCACAACTTGTGTGAAGGCGCTTCAGCAGGAAAATTCGAATCTCATCGACATGGTTTTGGAGCGGGTGAAAGGTAGATCTCAAATAGTGGTGACGGACCATAACTTCGTGATAGATGCACTGCCATCGGGAAAGATTGACGAACTTCACGAAACCGTGAAACTGATGTTAGGCGCTGGGTTTGAGAAGGAGTGCTTTGACGTGTATAGCCGTTTTCGGAGGGAGTGGTTGGAGGAGTGCCTAATAGATAAAATACTAGGCTTGCAAGAAATCAGCATCCAGAATGAGAAGGAGCAAGACAGAAAAGAATTTCTAATTAACATAGGCAGAAAATGGATTAAAGCTTTAACTGTCGCTCTCAGGATACTATTTCCCAATGAGCGTCGACTCTGCAATCGTGTCTTTTCGGGGTTCTCCTCTGCTTCTGATCGTTGTTTCACAGAGCTTTCCCAGGGAGTTACGCTTAAGCTGCTTAATTTTGCCGATACAGTTGCTGATGAGAGTCCTTCAGTGTGGAAGTTTTTCAACGTCATCTGTATGTTTAAGACATTGTGCGGTCTAATTCCAGAATTCCAATCGATGTTTCCTGATTCGTTGGTGAAGGAAGTAATTGCAGTCCATAACAGATTGAAGGAAGCAAGCAAGGACCTTTTTATGGAACTCGAGAATCTGATTTTCAGTATCCCGGAGGCAAAGCTTGTTGCTCCGGCTGATGGCCGGTATCATCCAATGCTGGATGAAGTCGTTTACTGTCTCATTTCTGCTTGCAGGTCACAGTGGATTTTGGATCAAATTGCTGATGAAGCAGGAACATATTCTTCTTTCACAGCTAAGATGAGCCGGATAATTGAGTTGTTAGAGAAAAAATTGGTAGCTAAGTCAAAAAACTATAAGGATCCTGCTTTGCGCTATATTTTTATGATGAACAATCGGGGGCGCATAGAATGGATGAATCAACGTTGGAAATGGGATACTATTTTGGGCGATGATTGGTTCCGGGAAAACAGAGCAAAAGGCCAACAAGACCTTGAGCTATATCACAGAAACTCATGGAATAAGGTGCTTAACTTTTTGAAGGTAGACATCAATGAATCAAGGGAAGACAAGCTCAGTTTGTTCAACCTGCACTTTGAGGAGATATGCAGAGTTCAGTCTACATGGTCTGTCCTTAATGAACAGGTGAGGAAAGAAATAATAAAATCTTTAGAGAACAAATTGTTGCCTGCATATGGAAACTTCATTGGGAGGTTGCATGATGTTCTTGGTAAGCGTGCGTATGAGTTTATTAAATATGGAATGTTTGATATACAAGATCGACTCAATCATTTGTTTCTTGGAAGCAAGACGATCGATCAGTAG 1992 0.4172 MLTQIFRWLMQSEVWRFIGFGSAVVGLLCYALSSSLNHIFGPWTVLKIFLYSVFSFTICLVILFAKTWQRSRSLRFKAHSALLVLTITSVYSFFSDKVMNGKPDAYSLISSAAFATMSLSLSRQTQCGFEADLLYFFLGCLLVQLMKIKLQLVIVGVGFSYSLIIVRSSFSSIDAAPQNEYVSLQDEHFVAVQVDSPQLPISTDIASMMQQLTTCVKALQQENSNLIDMVLERVKGRSQIVVTDHNFVIDALPSGKIDELHETVKLMLGAGFEKECFDVYSRFRREWLEECLIDKILGLQEISIQNEKEQDRKEFLINIGRKWIKALTVALRILFPNERRLCNRVFSGFSSASDRCFTELSQGVTLKLLNFADTVADESPSVWKFFNVICMFKTLCGLIPEFQSMFPDSLVKEVIAVHNRLKEASKDLFMELENLIFSIPEAKLVAPADGRYHPMLDEVVYCLISACRSQWILDQIADEAGTYSSFTAKMSRIIELLEKKLVAKSKNYKDPALRYIFMMNNRGRIEWMNQRWKWDTILGDDWFRENRAKGQQDLELYHRNSWNKVLNFLKVDINESREDKLSLFNLHFEEICRVQSTWSVLNEQVRKEIIKSLENKLLPAYGNFIGRLHDVLGKRAYEFIKYGMFDIQDRLNHLFLGSKTIDQ 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi579g00025 663 SUPERFAMILY Cullin repeat-like 212 655 IPR016159 -
Sebi579g00025 663 PANTHER EXOCYST COMPLEX PROTEIN EXO70 207 656 IPR004140 GO:0000145|GO:0006887
Sebi579g00025 663 Pfam Exo70 exocyst complex subunit 322 652 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi579g00025 663 Gene3D Exocyst complex component Exo70 191 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi579g00025 Sebi-Chr579 448829 450820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi579g00025 242 660 EXO70 exocyst subunit family AT5G58430 46.804 1.87e-110 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi579g00025 - - mtr:25490887 681.019