Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi579g00023 ATGGTGCCCATAATCATCCAAATTCTGAGATGGCTGATGCAGCCTTTAGTGTGGAGGTTTGTGGGCTTTGGTTCAGCTGTTGTTGGACTAGTTTGTTACGCTCTCAGCTCCTCCTTCAACCATCTATTTGGACAGTGGAATTTGTTTAAAATATTTCTTTACACTGCTTTCAGTTTCATCATCAGTCTCTTGATTTTGTTTGCAAAGATATGGCAGCAGTCCACAAGTCTCCGGTTCAAAGCTCATTGGGCATTTTTGGTTTTGACCATCACCTCAGTCTATTCCTTTTTCTATGATAAAGTAGTTAATGGGAAACCAGATGCATATAGTCTAATTTCCTGTTCTGCGTTTGCTATCATGACACTGAGCTTGTCAAGGCAAACACGGTGCGGATTCGAAGTGGATCTTCTCTATTTCTTTCTCGGATGTCTAAACGTACAACTCATGAAGATAAAATTGCCGTTAGCTATTCTTGGAGCAGGCTTCAGCTACTCCCTCATTATTCTCCGTTCTTACTTTTCTTTGATAGATACCGCACTACAAAATGAGTATGTTGGACTCCAAGATGAACGTTCTGTAGTCATTGAAATCCAGTCACCACAACTGCCAATTAGCAGTACTAGTATCGCTAGTGTGATGCAACAGCTCACAATTTGTGTGAAGGCGCTTCAACTCGAAAATTCCAATCTCATCGACATGTTTTTGGAGCAGGCGAAGGAATACTTTGAAGCTAACTCTGAACCAGTAGTAACCGACCATAACTTCATCATCGATGCGTTGCCGTCGGGAAGGATCAACGATCTTCACGAAACGGTTAATTCGATGGTGGGCGCTGGGTTTGAGAAGGAGTGCTCCGAGGTGTATAGCAGCTGGCGGAGAGGATGGCTGGAGGAGTGCCTAATAAATAAGTTATTAGGGTTGCAAAAGGTCAACCTCGAGAATCAACAGGATAGGGAAGCATTTGCCAGTGAAATAATGACTGGAAGATGGATTACGGCTTCCAAGGTCACTCTCAAGATACTATTTCCTGGTGAGCGACGACTCTGCGATCATGTCTTTTTGGGATTCTCCTCTGCCGCAGATCGTTGTTTCACAGAGGTTTGCAGGGGAGCCACGATTCACCTGCTTAATTTTGCTGATGCTGTTGCCAGTGGGAGCCCTTCAGTGAGGCGATTGTTCCAAATGCTCGGCGTGTTTCAGACACTGCATGATCTAATTCCCCAATTCCAATCATTGTTTCCCGATTCGTTGGTGAACGAAGCAATCGCAGTTTATAACAGATTGGGAGAGGCAAGCAGAGACGTTTTCATGGAATTAGACAATCTGATTTTCCGTATCCCGGAGGCCAAGCTAATTGCCCCAGCCGATGGCGGTTATCATCCAATGATGGACAACTTCATCAGTCACCTCATCTCTGCTTGCAGGTCACGGAAGATCCTGGAGCAAATTTTACAAGATTACCCCAAGGATGCCAATGGAGTTGGAACATCTTCTATATTCACAGTGAAGATGAAGAAGATAATGGAATTGTTAGAGAGAAAATTAATAGTGAAGTCCAAAATCTACAATGTTCCTGCTTTGCGCTATATTTTTATGATGAATAATCGGAAGCGCATAGAAATGATGGATAAAATCTGGGAATTTGGAACAATTACTGGCAATGATTGGTTCGGAAAAAACAGGGCAAAAGTCCAACACAATCTTGAACTCTATCAAAGAAGCTCATGGAATAAGCTGCTTGAGTTTATGAAGCTAGATAGCAATGAGTCAGTGGCACCCAACGTTGCAGTAGAGTCAATGAAAGACAAACTCAATTTGTTCAACCTGCACTTTGAAGAGATATGCAGAGTTCAGTCTACATGGTTTATCTTTAATAAGCAGCTAAGGGAAGAAATAATAACATCCGTAGAAAACATATTGTTGCCTGCATATGGAAATTTCATTGGGAGGTTGCACGATGTTCTTGGGCAAAAGTCCAACACAATCTTGAACTCTATCAAAGAAGCTCATGGAATAAGCTGCTTGAGTTTTTGA 2034 0.4248 MVPIIIQILRWLMQPLVWRFVGFGSAVVGLVCYALSSSFNHLFGQWNLFKIFLYTAFSFIISLLILFAKIWQQSTSLRFKAHWAFLVLTITSVYSFFYDKVVNGKPDAYSLISCSAFAIMTLSLSRQTRCGFEVDLLYFFLGCLNVQLMKIKLPLAILGAGFSYSLIILRSYFSLIDTALQNEYVGLQDERSVVIEIQSPQLPISSTSIASVMQQLTICVKALQLENSNLIDMFLEQAKEYFEANSEPVVTDHNFIIDALPSGRINDLHETVNSMVGAGFEKECSEVYSSWRRGWLEECLINKLLGLQKVNLENQQDREAFASEIMTGRWITASKVTLKILFPGERRLCDHVFLGFSSAADRCFTEVCRGATIHLLNFADAVASGSPSVRRLFQMLGVFQTLHDLIPQFQSLFPDSLVNEAIAVYNRLGEASRDVFMELDNLIFRIPEAKLIAPADGGYHPMMDNFISHLISACRSRKILEQILQDYPKDANGVGTSSIFTVKMKKIMELLERKLIVKSKIYNVPALRYIFMMNNRKRIEMMDKIWEFGTITGNDWFGKNRAKVQHNLELYQRSSWNKLLEFMKLDSNESVAPNVAVESMKDKLNLFNLHFEEICRVQSTWFIFNKQLREEIITSVENILLPAYGNFIGRLHDVLGQKSNTILNSIKEAHGISCLSF 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi579g00023 677 PANTHER EXOCYST COMPLEX PROTEIN EXO70 205 657 IPR004140 GO:0000145|GO:0006887
Sebi579g00023 677 Pfam Exo70 exocyst complex subunit 329 656 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi579g00023 677 Gene3D Exocyst complex component Exo70 193 665 - -
Sebi579g00023 677 SUPERFAMILY Cullin repeat-like 223 659 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi579g00023 Sebi-Chr579 403493 408091 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi579g00023 250 654 EXO70 exocyst subunit family AT5G58430 51.095 1.96e-125 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi579g00023 - - gmx:100788866 691.419