Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi579g00020 ATGTTTGCAGGGGTAGGTTTACCAAATGCAAAAATTCAATTTACCGAGGGGGGTAACACTTCTGAGATCCTTGATGTAGATGTTGACAGGTGGTCTTTCTTTGAAGCTCGAGACATAGTGAAAGAACTAGGTTTTAAGTCTGATTTCAACTTATGGTGGAACCTTGATGGGGTTGGGAGCTTAGTTCATCTTAGGCCATTGTCAGAGGATGAGCATGCGAGTGAGCTTAGCTATTCTACAATTCAGAATAAGGGTGTGGCTCATGTGTTTGTAGACCATGTCGGGGCTGTTATTGATGGTGTTGGATCTGTGAGTAACCAAGTTACTGATAATGGTACTAGTGATGTTGGTGTGGGAACTGGAACTAATGGAGTTGAACCTATTGGGGATGAATTTGTAGATGGTGAAGATGATGGGAATAACAGTGATGATAGTGTAAAAGGAATCCATTTCACTGATAGTGAAGAGGATAGAACTTTCGGACTTGATGATGGTTTTGGGATAGAAGATGGTTCTCAAGTTGGAAGAAGGTTGACGAGAGAGGGTAGAGCTAAAATCCAAATAAGGAGAAATCCATTTCATGGTGCTGGTCCAAGTGGTTCAAATGGTCAAGAGAACATGGTGCCTACGCTCATCCAAATTCTGAGATGGCTGATGCAGCCATTAGTATGGAGATTTGTGGGCTTTGGTTCAGCTGTTGCTGGGCTACTTTGTTACGCTCTGAGCTCTTCCTTCAACCATCTATTTGGAAACTGGAATTTGTTGAAGATATTCCTATATAGCGTTTTCAGTTTCATCATTTCCTTCATGGTTTTGTTCGCAAAGATATGGAAACACTCTAGAAGTCTCCGGTTCAAAGCTAATTGGGCATTTATGGTTTTGACGATCACATCGGTCTATTCCTTTTTCTCCGATAAAGTGATGAATGGGAAACCAGATGCATACAGCCTAATTTCTTGTGCTGCCTTTGCTATTATGTCACTCAGCTTGTCGAGGCAAACTCAATGTGGATTCGAAGTGGATCTTCTCTATTTTTTTCTCGGATGTCTAATCGTACAGCTCATGAAGATTAGATTAGAGTTGGTTATTGTGGGTGCAGGTTTCAGTTATTCCCTCATTATTCTTCGTTCTTACTTTTCTTTGATAGATGCCGCTGCCGCACTACAAAATGAGTATGTTGGACTCCAAGATGAACATTCTGTAGTCATTGAAATCCATTCACCACAACTGCCAATTATTGCTAGTATGATGCAACAGCTCACATCTTGTGTGAAGGCGCTTCAACTTGAAAATTCGAATCTCATCGACATGTTTTTGGAGCAGGTGAAGAAATACTTTGAAGGTAACTCTGAACTAGCAGTAACCGACCATAACTTCATCATCGATGCGCTGCCGTCGGGAAGGATCATCGATCTTCACGAAACCGCCAAGTTGATGGTGGGCGCTGGATTTGAAAAGGAGTTCTCTGAGGCGTATAGCAGCTGGCGGAGAGGATGGTTGGAGGAATGCCTAATAAATAAGTTATTAGGGTTGGAAGAAATCAACATCAAGAAGATAATGACCGGAGGATGGATTAGAGCTTCCAAGGTCACTCTCAAGATACTATTTCCTGGTGAGCGACGACTCTGCGATCATGTCTTTTTGGGATTCTCCTCTGCCGCAGATCGTTGTTTCACAGAGGTTTGCAGGGGAGCCACGATTCACCTGCTGAATTTTGCTGATGCTGTTGCCAGTGGGAGCCCTTCAGTGAGGCGATTGTTCCAAATGCTCGGCGTGTTTCAGACACTGCATGATCTAATTCCCCAATTCCAATCATTGTTTCCCGATTCGTTGGTGAACGAAGCAATCGCAGTTTATAACAGATTGGGAGAGGCAAGCAGAGACGTTTTCATGGAATTAGACAATCTGATTTTCCGTATCCCGGAGGCCAAGCTAATTGCCCCAGCCGATGGCGGTTATCATCCAATGATGTATAACTTCATTAGTCACCTCATCTCTGCTTGCAGGTCACGGCAGATCCTGGAGCAAATTTTACAAGATTACCCCAAGGATGCTAATGAAGTTGGAACATCTTCTATATTCACAGCGAAGATGAAGAAGATAATGGAACTGTTAGAGAGAGAATTGGAAGCGAAGTCCAAAGTCTACAGTGTTCCTGCTTTGCGCTATATTTTTATAATGAATAATCGGAAGCGCATAGAAATGATGGATGAAATATTCCAATTGAGAACCATTACTGGCAATGATTGCTAG 2253 0.4265 MFAGVGLPNAKIQFTEGGNTSEILDVDVDRWSFFEARDIVKELGFKSDFNLWWNLDGVGSLVHLRPLSEDEHASELSYSTIQNKGVAHVFVDHVGAVIDGVGSVSNQVTDNGTSDVGVGTGTNGVEPIGDEFVDGEDDGNNSDDSVKGIHFTDSEEDRTFGLDDGFGIEDGSQVGRRLTREGRAKIQIRRNPFHGAGPSGSNGQENMVPTLIQILRWLMQPLVWRFVGFGSAVAGLLCYALSSSFNHLFGNWNLLKIFLYSVFSFIISFMVLFAKIWKHSRSLRFKANWAFMVLTITSVYSFFSDKVMNGKPDAYSLISCAAFAIMSLSLSRQTQCGFEVDLLYFFLGCLIVQLMKIRLELVIVGAGFSYSLIILRSYFSLIDAAAALQNEYVGLQDEHSVVIEIHSPQLPIIASMMQQLTSCVKALQLENSNLIDMFLEQVKKYFEGNSELAVTDHNFIIDALPSGRIIDLHETAKLMVGAGFEKEFSEAYSSWRRGWLEECLINKLLGLEEINIKKIMTGGWIRASKVTLKILFPGERRLCDHVFLGFSSAADRCFTEVCRGATIHLLNFADAVASGSPSVRRLFQMLGVFQTLHDLIPQFQSLFPDSLVNEAIAVYNRLGEASRDVFMELDNLIFRIPEAKLIAPADGGYHPMMYNFISHLISACRSRQILEQILQDYPKDANEVGTSSIFTAKMKKIMELLERELEAKSKVYSVPALRYIFIMNNRKRIEMMDEIFQLRTITGNDC 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi579g00020 750 Pfam Exo70 exocyst complex subunit 524 749 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi579g00020 750 PANTHER EXOCYST COMPLEX PROTEIN EXO70 383 733 IPR004140 GO:0000145|GO:0006887
Sebi579g00020 750 Gene3D Exocyst complex component Exo70 391 750 - -
Sebi579g00020 750 SUPERFAMILY Cullin repeat-like 427 736 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi579g00020 Sebi-Chr579 359913 365512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi579g00020 454 733 EXO70 exocyst subunit family AT5G58430 52.365 2.74e-85 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi579g00020 - - cam:101500706 591.267