Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi579g00018 ATGTACGAACGGTTTAGAAATCTGTTAACTCACCCGAAGTTCTGGAGAATTGTGGGGTTTGTGTCAAGTGTCATTGGGATGCTCTGTTACGCATGGAGCCTCTCTTTCGAACACGTAGGTGAAAAGTATCACATTTTAAAGATCTCTCTATACGGTGTGGTGAGTTTCACAATCATCTTTGTTATGTTCTTTGCAAGAAAAGGGTTAGGGCGGTTTTCAAAGAGTTTCCTTTTGAAAGCTCTAGTTGGAGTTTTGGCTCTAATGCTAACCTCTTTATACAACTTTTTCAGCGATAAAGACTCAAACCAAAAAACAGATGTTTTCAACTTGATTTCTAATGGGTCATTTGCTTTAATGTTGTTGAGCTTGTCAAAGCAAATTGACCTTGGCTTTGAATTGGAACTACTTAATTTTTACCTTGGATGTCTCACTATACAATTGATGAAGATCAACTTGGGGTTCGTTTTGGTTGGAGCAGCTTATTGTTATTTGCTCAATGTCCTTCACTCCTATTCAGATTTCAATCAAGAGATTAGAACTGCTAGTAATGAAGAACATGTGGCAATTGAAATTGAAACACCTAAGGTAGAAGAAAGAGGAGGACCTATAGTACAACTCTATTCAATTCTTGGAATTGAGATAAAAAATGAGGAGATAGTAATGTACCCTGAAGATCTAGAAGCCAAGCTTATAGAAGCAATGGCTTCAGGTCTTGAGAAGGAGCATTGCTACCCTGTTTTCTGCAGTTGGAGAAGGCTAGTTTTAGAGGAGAGGTTATTAATAAAGAACCTCATGATGAGTATTGAAGAGGTCCAAAAGTTGCCTTTGAAATATCTCAAAGATGAAATTGAATGTTGGATTAAAGCTTCCAAGGATGGTTTTATGACACTGTTTCCAAATGAAAGGCATCTATGTAACCGTGTGTTTGGATTCTCATCTCCTTTTGCTGAAAGCTCTTTCATGGAGATATGTCATGAACCAACCATTCATCTATTGAATTTTGCTAATGCTGTGGCTTGTAGTACAAGCCGGTCATCACCAGAGCGTTTGTTTAAAATAGTGCTTGTGTTTGAGACACTGAATGGAGTTTTACCTGAGTTGGAGTCAATATTCTCAGGTGATTGTTGTGTGGTTCTTTGGAATGAGGCAATGAGAATTTGTAAGAGGTTAAGAGATGCAATTAGAGGAGTTTTTATTGAGCTTGAAAATCTGATTCGTCAGGATCCAGGGAAGGTTGTTGTTTGTGGTGGTGGACTTCATCCAACTAATCACTATTTGATGAATTATCTCTTTGCAGTTTGTCAATGTTGGAAGACACTTGAGCTTGCTTTTGATGATGAAGGTTCACCAGATTCTACACCTTCATTTTCATTGTCTCTTCAGGTGGCTCAGATTTTGGAGTTGTTGGAGAGCAATTTGAAATCGAACTCCAAAATCTACAAGGACTCTTCCTTGTGTTCTATTTTCATGATGAACAATTGGAGGTACATTGTTCACAAGGTGAAAAGGTGTGAATTAGAAAGGGTGTTAGGTGATGAGTGGATACAGAAACACATAGCGAAAATGGGGCAGTACCTTGTAAACTACCAGAGAAGGGCGTGGGACGAGGTACTTGGAATGTTGAATGTAGATAATGATGAGTCACTAGTGGTGGCAGCTTCTTCAGAGTTATGGAGAGAAAAGGTTGAGATGATTAAGATGAAATTTGAGGAGATATGTGAGATGCAGGGTACATGGGTTGTGATTGATGAGCAGATGAGACAAGTCATGAAAAGTTCCTTGAAGAAAATCTTGTTGCTGGCGTTTGAAAAGTTCAGCGCAAGATTCCAAAATGCAGTAGATCCTGATCGAAATGATATGGACATGCATGTGGATTTTGGGGTCCTTGATGTTGTGGTTCTTATAGACAAGCTGTTCCAAGGAAAAGATGAGCACAGAAACCCCAGGTACGTGTCGTTGCTGAATTTTCAAGATTTTTTTTTTCTTAGTTAG 1992 0.3876 MYERFRNLLTHPKFWRIVGFVSSVIGMLCYAWSLSFEHVGEKYHILKISLYGVVSFTIIFVMFFARKGLGRFSKSFLLKALVGVLALMLTSLYNFFSDKDSNQKTDVFNLISNGSFALMLLSLSKQIDLGFELELLNFYLGCLTIQLMKINLGFVLVGAAYCYLLNVLHSYSDFNQEIRTASNEEHVAIEIETPKVEERGGPIVQLYSILGIEIKNEEIVMYPEDLEAKLIEAMASGLEKEHCYPVFCSWRRLVLEERLLIKNLMMSIEEVQKLPLKYLKDEIECWIKASKDGFMTLFPNERHLCNRVFGFSSPFAESSFMEICHEPTIHLLNFANAVACSTSRSSPERLFKIVLVFETLNGVLPELESIFSGDCCVVLWNEAMRICKRLRDAIRGVFIELENLIRQDPGKVVVCGGGLHPTNHYLMNYLFAVCQCWKTLELAFDDEGSPDSTPSFSLSLQVAQILELLESNLKSNSKIYKDSSLCSIFMMNNWRYIVHKVKRCELERVLGDEWIQKHIAKMGQYLVNYQRRAWDEVLGMLNVDNDESLVVAASSELWREKVEMIKMKFEEICEMQGTWVVIDEQMRQVMKSSLKKILLLAFEKFSARFQNAVDPDRNDMDMHVDFGVLDVVVLIDKLFQGKDEHRNPRYVSLLNFQDFFFLS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi579g00018 663 PANTHER EXOCYST COMPLEX PROTEIN EXO70 229 641 IPR004140 GO:0000145|GO:0006887
Sebi579g00018 663 SUPERFAMILY Cullin repeat-like 229 639 IPR016159 -
Sebi579g00018 663 Pfam Exo70 exocyst complex subunit 285 612 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi579g00018 663 Gene3D Exocyst complex component Exo70 176 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi579g00018 Sebi-Chr579 336243 338234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi579g00018 225 646 EXO70 exocyst subunit family AT5G58430 48.122 2.65e-120 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi579g00018 K07195 - aprc:113848528 876.7