Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi579g00016 ATGGCTGAGGTTTTACTTGGACTCGTGTTCGAGAAGTTGCTCTCTTTGATTCAGAATGAATTTGCAACCATGCCTCGAATCAAGGAAAAGGCTGAAAAGTTATTAAGCACTTCACAGCTGATCAAGGTCGTCCTTCAAGATGCTGAGGAGAAACAAATGACAGAAAAACCTGTTAAGCTTTGGCTGCAGAAACTCAAAGATGCTGTGTATGTGTTAGATGATATCCTTGATGAATGCTCCATTGAATCTCATCGACTTAGGGGTCCATCCTCTTTCAAACCAAGGAACATCGTGTTTCGTTATAGGATTGGCAACAAGTTGAAAATGATTTCAAGGAGATTTGATGAAATTGCTGAAAGTAAAAACAAAATTTTTCTGAGAGAGCATGTTTGGGAAAGGTCAGGTAGAGTGGCAGAATGGCGTGAAACCACTCCTACCATTATCCAACCTCAGATATATGGACGTGATGATGATAAAGAGAAGATTGTGGAGTTTCTTCTCAACCAAGCACGTGCCTCTGACTTCCTTTCCATCTATCCCATCGTTGGCTTAGGTGGTGTTGGAAAGACAACTCTGGCTCAAATGGTCTACAATGATGATCGGGTACGTAGTACTTTTAACACACAAATTTGGATTTGTGTTTCAGAGGATTTCTCTCTCAAGAGGATTTTGTGTTCTATTATAAGATCTATCTCAGATGAAAAGTGTGATGTTTGGGATTTACATAAAATAGGAAGAGAAGTGCAGGAATTGTTGCAAAGTAAAAGATACTTACTTGTTTTTGATGATGTGTGGAAAATGAATCAAGAATTGAAATCCGGATTAACCCAAGACAAGTGGAACAAGTTGAAATCCTTGTTATCATGTGGATCCAAAGGTGCTTCTATTTTGGTATCCACTCGTGATAGAGATGTTGCAACAATCATGGGAACATGTCAAGCTCATCATTTGTCCTGTCTCTCTGACCATGAATGTTGGTTGTTATTCAAACAATGTGCATTTGCCAACAGAGAAGAGCGTGAAGAGCTTGTAGCTATAGGCAAGGAGATAGTAAAGAAGTGTGGGGGATTGCCTCTTGCAGCACGAGCATTAGGAAGTTTATTGTACACAAAGAGTGAGGAAAAGGAGTGGCTTGAAGTTAAAGAAAGCAGGCTTTGGGATTTACAAGATGAAAATTCTATTTTGCCTGCCTTGAGGTTGAGCTATGTTCATTTGATGCCAGCCTTAAAACAATGTTTTGCTTTTTGTGCCATATTTCCCAAAGATGAAGAAATTATGAAGGAAGATCTGATTCACCTTTGGATGGCCAATGGGTTTATTTCATCCATGAGATACTTGGAGGTAGAAGATGTTGGCAATATGATTTGGAATGAATTGGACCAAAAATCATTCTTCCAAGATATCAAGATCAATTATGAAGGAGACATTTCTTTCAAGATGCATAATCTTATCCATGATCTTGCTCAGTCAGAGTGGATGGTTTTCGGGAATTCAAATGTGACTGATTCATTGACACAAGGATTTCTAACTGAGAAAATTGAATCCTTGCGAACATTACATGTCTCAGAAGTTAATGACACAAGGATTTCTAGTTGCTTTCATTCTCTTCGGGTTTTAAGGACATGTTCTTTCACGTTGTTATCATCACTTGCGAATTTAATTCATTTGAGGTATTTGGAGCTCTATGATTTACTTGAGATAGAAACCCTTCCTGACTCAATTTATAGCTTGCAGAAATTGGAAATCTTGAAATTGAAACGACTTCGTGATCTTCTGTGTCTACCAGAACACTTGACCTGCTTACAAAATCTGAGACATCTCATCGTTGAAGATTGTCTGTCATTGTCTCAGACCTCTCCTAACATTAGAAAATTATGTTGCCTAAAATCACTAACTGTGTACATTGTCGATTCAAAGACAGGGCATAGCTTGGCAGAATTACGTGATTTAAATCTAGGTGGAAAGCTGAGCATTGAAGGCCTTGCTAATGTTGGCAGTTTATCTGAAGCTAGAATGGCCAATTTGATAGGTAAAAAGGACCTTAAAAAATTATGCTTGTCATGGTACAAGTACTGGGACCATACTGGTAAAACCAAGTCATTTGCTGAGAAAGTAATTGAAGTGCTTCAACCTCCCCCAAATCTCAAGTCCCTAGAGATATCCAATTATCATGGATTATGCTTGCCAGGTTGGATCATGAATCTTAATAGTTTAGTTGATCTTAAACTTATTCATTGCTATTACTGCTTACAAATTCCGTCCCTTGCTAAACTGCCATTTTTAAGAAAACTTGAAATAAGGATTATGCATGATGTGCAATACGTGGATGATGATGAATGTTACGATGGTGTGGAGGTAAGGGCTTTCCCATCTTTGGAGGAACTCTATTTAGATAGGTTACCAAAGTTAGAGCGGTTGTTGAAAGTGGAAAAGGGGGAAATGTTCCTCCGTCTTTCTAATGTTACCATCCTTGATTGCCCTAAACTTTGGTGGCCATGCCTCCTATCTGTTAAATGTCTCAAAGTAAAAGGATGTAAAAATGAGTTGCTGAAGTCAATCGCTAGTATGTACAATCTTACCTCCCTTCACCTTGAGTATGGTTTTGGTGGTGAAGAACTCACATGCTTCCCACCCGAGGGAATGTTGAGAAACCTGACTTGTCTTCAAACTCTGGTAATAGATTCTTTCCCGGAAATGAAGGAATTATCAAGTGAGCTCTTCAACCTTATCGCTTTAGAGGATCTGTCAATCAGATGCTGTCATGAGCTTGAGTCTTTACCGGAGCAAGGTTGGGAAGGTCTTTGCTCCCTTCAATATCTTTCATTTTATGATTGTGGAGGATTGAGATCCTTGCCTGATGGTATTCAACATCTCACTTCACTTCACCGTCTAAGAGGTATACGTCTTCCACCTTGGATCAATATCTGCTTCCATAACCTTGTTGGTGAGATAAATAGCTGTTATTTGCCCATGTTGCTGACAGAGTCCTTTATAGGAAGACTTACACAGTGGCGTCGAGAGGATTCTATCATTCCACATGCAATTTTTGCAATCCAAAAATGGGCATCAAGAACCATGACAGGTTCAGACTTTAGAGCATAA 3102 0.391 MAEVLLGLVFEKLLSLIQNEFATMPRIKEKAEKLLSTSQLIKVVLQDAEEKQMTEKPVKLWLQKLKDAVYVLDDILDECSIESHRLRGPSSFKPRNIVFRYRIGNKLKMISRRFDEIAESKNKIFLREHVWERSGRVAEWRETTPTIIQPQIYGRDDDKEKIVEFLLNQARASDFLSIYPIVGLGGVGKTTLAQMVYNDDRVRSTFNTQIWICVSEDFSLKRILCSIIRSISDEKCDVWDLHKIGREVQELLQSKRYLLVFDDVWKMNQELKSGLTQDKWNKLKSLLSCGSKGASILVSTRDRDVATIMGTCQAHHLSCLSDHECWLLFKQCAFANREEREELVAIGKEIVKKCGGLPLAARALGSLLYTKSEEKEWLEVKESRLWDLQDENSILPALRLSYVHLMPALKQCFAFCAIFPKDEEIMKEDLIHLWMANGFISSMRYLEVEDVGNMIWNELDQKSFFQDIKINYEGDISFKMHNLIHDLAQSEWMVFGNSNVTDSLTQGFLTEKIESLRTLHVSEVNDTRISSCFHSLRVLRTCSFTLLSSLANLIHLRYLELYDLLEIETLPDSIYSLQKLEILKLKRLRDLLCLPEHLTCLQNLRHLIVEDCLSLSQTSPNIRKLCCLKSLTVYIVDSKTGHSLAELRDLNLGGKLSIEGLANVGSLSEARMANLIGKKDLKKLCLSWYKYWDHTGKTKSFAEKVIEVLQPPPNLKSLEISNYHGLCLPGWIMNLNSLVDLKLIHCYYCLQIPSLAKLPFLRKLEIRIMHDVQYVDDDECYDGVEVRAFPSLEELYLDRLPKLERLLKVEKGEMFLRLSNVTILDCPKLWWPCLLSVKCLKVKGCKNELLKSIASMYNLTSLHLEYGFGGEELTCFPPEGMLRNLTCLQTLVIDSFPEMKELSSELFNLIALEDLSIRCCHELESLPEQGWEGLCSLQYLSFYDCGGLRSLPDGIQHLTSLHRLRGIRLPPWINICFHNLVGEINSCYLPMLLTESFIGRLTQWRREDSIIPHAIFAIQKWASRTMTGSDFRA 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi579g00016 1033 Pfam NB-ARC domain 156 401 IPR002182 GO:0043531
Sebi579g00016 1033 SUPERFAMILY L domain-like 479 827 - -
Sebi579g00016 1033 Gene3D - 140 314 IPR027417 -
Sebi579g00016 1033 FunFam Probable disease resistance protein At1g63360 402 490 - -
Sebi579g00016 1033 Gene3D - 319 400 IPR042197 -
Sebi579g00016 1033 FunFam Probable disease resistance protein At1g61300 135 314 - -
Sebi579g00016 1033 Gene3D Ribonuclease Inhibitor 833 987 IPR032675 -
Sebi579g00016 1033 Gene3D - 401 491 IPR036388 -
Sebi579g00016 1033 Gene3D - 6 118 - -
Sebi579g00016 1033 PANTHER DISEASE RESISTANCE PROTEIN RP 41 806 IPR044974 GO:0006952
Sebi579g00016 1033 Pfam Rx N-terminal domain 6 99 IPR041118 -
Sebi579g00016 1033 SUPERFAMILY RNI-like 789 964 - -
Sebi579g00016 1033 Gene3D Ribonuclease Inhibitor 499 825 IPR032675 -
Sebi579g00016 1033 PRINTS Disease resistance protein signature 354 368 - -
Sebi579g00016 1033 PRINTS Disease resistance protein signature 575 591 - -
Sebi579g00016 1033 PRINTS Disease resistance protein signature 178 193 - -
Sebi579g00016 1033 PRINTS Disease resistance protein signature 251 265 - -
Sebi579g00016 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 416 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi579g00016 Sebi-Chr579 310496 313761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi579g00016 181 767 WRKY Transcription Factor Family AT5G45050 23.102 4.08e-09 58.9