Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi579g00014 ATGAACTTGAGGTCTGACATTTTTGCAAAGATGATTAACCTAAGATTTCTCAAGTTCTACTCTCGTTTGGGAGAGAAATGTAATATTTCCTTTCCTGCTGGCCTTGAGTCTTTGTCTAATGAATTACGGTACCTCCATTGGAGTGGATGTCCTGTGGAGTCTCTACCATCAACCTTTTGTCCTGAGAAACTTGTTGAGCTTTCCATGCCAAACAGTCATGTTAAAAAACTATGGGATGGAGTCCAGGATCTTATTAATTTACAGAAAATGGACCTCAGCTGTTCTCAACACTTGATTGAGCTTCCAGATTTCTCCATGGCAATAAATCTTCAAAGCATTAACCTCTCTGGATGTGTAAGTCTAAGCCATGTTCACCCATCTATTTTATCTCTCAAAAAGCTTGTCAATTTAAACATGGTTTGGTGCAAAAGGTTAAAGAGTCTTTTAAGCAATGCCCCTTTAAGATCTCTCAAAATTCTTGAGCTATATGGCTGCTCAAGTCTTAAGGAATTTTCAGTGACATCTGAAGAAATGACATATTTGGATTTAAGAAATACTGCTATTAATGAATTGCCAGCATCAATTAAGCACCTTGGTAATCTTATGAACTTGGAGTTGAGTTGTTGCGGGTATCTTAGGAATCTTCCAAATGAGTTCTCATGCCTGAGATCACTTGGCCGACTGGTACTTTCTGATTGCAGAAAACTTGACACGTCAAATCTGCATTTTCTATTTGATGGCCTCCGTTCATTAGGATACCTGTGTCTAGACAATTGTGGTAACCTAACTGAACTCCCTGACAACATTAGTTTGTTATCATCATTGTATTATTTATCACTAAGTGGAAGCAATGTGGAGAACATGACTGCAAGCATCAAACATCTTTCACAGCTAGAGTCTCTTGACTTGTGCAAATGCATGAGGCTTCAATCTTTACCAGAACTCCCACCATCCATTGAAGTGTTGGATGTCACTAATTGCACCTCCTTGGAGACAGTGCTCACCTCTCCTGTTATTGATGAACTACTACAAGAGCACAAGGTATTCATTTCATTCAAAACTTGTGTGAATTTGAGTGAATATTCCCGCAATGTTATTATGACAGATGCCCATGTCAGAATAAAGGAGGTAGCATTTGTTCATGTTTCAGCAAAAATAGAAAGGAGTGACCCTTGTTACTTTTTCAAATCAGAGGTGATGTCTTCTTATCATCATCCACCAACTGTTATTTACCCAGGAAGTAGAGTTCCAGAGTGGTTTCATTATCGGTCAACTAAGCCATCCATAACAATTGAACTTTTACATTCTCCACAATCCAACATATGTGGTTTCATATTCTGCCTCATTCTTCCTCCATCCCCATCAAATGAAAATTGCAATTGGAAAATTGGATGTGAGTGCTACTTGGAAAGTGGTGAAAAGATTAGAAACACAAGTATGTGCTCTTTTGCAACAGGACTGGTTTCAGATCATGTGTACTTGTGGTATGATGAAAACTTCTGTCTTGAGATGTTTAATACAATTGATGAAAATAGAATTGATGACCAGTACACCTCTTACAATCCAAAGCTTTCATTTGAATTCTTTGTTGAGACTGAGGATAAGTTGAATGTGGTCATTCAAGAGTGTGGGATCTGCCAAATAAATGGTTCAGAATATCTCAATTTTGTTGAACAATTGGGATCTGAGTTGGAGTTGGGAAATAAAATAAAGAGAGGCAGGGATATTTATGAGTTAGAATCAAGTGAAAGAGGGACTCAAGTTGAAGGCTTTTATGAGGAAGAAGATGAACAAGAATATTCATTTCGTCAAACAAAGAAACAGAAGGTGTTCTTTGACTTCTAA 1845 0.3772 MNLRSDIFAKMINLRFLKFYSRLGEKCNISFPAGLESLSNELRYLHWSGCPVESLPSTFCPEKLVELSMPNSHVKKLWDGVQDLINLQKMDLSCSQHLIELPDFSMAINLQSINLSGCVSLSHVHPSILSLKKLVNLNMVWCKRLKSLLSNAPLRSLKILELYGCSSLKEFSVTSEEMTYLDLRNTAINELPASIKHLGNLMNLELSCCGYLRNLPNEFSCLRSLGRLVLSDCRKLDTSNLHFLFDGLRSLGYLCLDNCGNLTELPDNISLLSSLYYLSLSGSNVENMTASIKHLSQLESLDLCKCMRLQSLPELPPSIEVLDVTNCTSLETVLTSPVIDELLQEHKVFISFKTCVNLSEYSRNVIMTDAHVRIKEVAFVHVSAKIERSDPCYFFKSEVMSSYHHPPTVIYPGSRVPEWFHYRSTKPSITIELLHSPQSNICGFIFCLILPPSPSNENCNWKIGCECYLESGEKIRNTSMCSFATGLVSDHVYLWYDENFCLEMFNTIDENRIDDQYTSYNPKLSFEFFVETEDKLNVVIQECGICQINGSEYLNFVEQLGSELELGNKIKRGRDIYELESSERGTQVEGFYEEEDEQEYSFRQTKKQKVFFDF 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi579g00014 614 Pfam C-JID domain 411 549 IPR045344 -
Sebi579g00014 614 Pfam Leucine Rich Repeat 63 82 IPR011713 -
Sebi579g00014 614 PANTHER LEUCINE-RICH REPEAT-CONTAINING 152 411 - -
Sebi579g00014 614 Gene3D Ribonuclease Inhibitor 177 360 IPR032675 -
Sebi579g00014 614 Gene3D Ribonuclease Inhibitor 2 176 IPR032675 -
Sebi579g00014 614 SUPERFAMILY L domain-like 5 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi579g00014 Sebi-Chr579 245064 247260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi579g00014 1 301 WRKY Transcription Factor Family AT4G12020 38.535 1.77e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi579g00014 - - mtr:25479456 966.452