Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi577g00039 ATGAGAGGTTTGAATTTTGGTTCAAAGAATCCTATGGATGGAAATGAAACAGAATCTGTTCAGCGAGGTAGTTGTCCATTTGTTATGGAGGATGATGATGGAGGTGTTTTTGTGGTAGATGAGAATTGGGTCAATAGTTGTGCAGTTGAGGGTGAGGATCATATTGGTAATTCACATTCATCTGAGAATAATGGTGAGTTTGGAGATGGTTTTTTTTGTAATGATGAAAATGGGGGTGTTTACTTGGTGGGAGTAGATTGGAATGAAGAAGATGAAGAAGGTGATGGGGAGAATTGTGGAGAGGAAAAAATTTTAATTGATACAAATGATGATATACTTAAGATGGGAGATCTCTCTTTGTTTAGTCCACATGAAATAGAGAAATATGAATTTGGAAATATTGACATAGCATACAAGTTCTACTTTGAATATGGGTTTGCTAATGGCTTTGGGATACGAAAGGGAAGAACTTTGAAAAATAAGAAAACGTTGGAGGAGTATCAGAAAGAGTTAATGTGCTGTAGAGCTGGCCATCGTGAAGACCGTGGTCTCAGATTGGAAGATAGGGTCTGTGAGCAAAAAGCTCATACTATGTGTGATTGTAAGGCAAGATTTCATATTCGTGTGAATAAGTTATCTGATCGGTGGTTTTGTATTTGCTTTGAAGATGAACACAACCATGATCGTCTCGGAGCAGTCCATTGTAGCATGCTTCCGGTGTATAGAAGAATGTCTGACAGTGATGTGGTCCAAATGAATAACATGATGAAGGTTGGTATTAGGCCACCAAACATATTCAACACTTTTGCTAGCCAGTCTGGGGGGTATGAGAAGATAGGTTTTAGGAAGAAAGACATGTATAACAAGATTAGTGAGCAAAGGCGGAGTTTATCTTCGGATGCTAAAGGAGCTTTGGAATACCTTGGGGTGGCTTCTTTATATGAGAAGAGGAGTATGTGGGCTACTGCTTATCTTCGGGGGAAAATTTTTGGTGGGTTTAGAACAACTTCAAGGTGTGAGGGATTGCATTCCGAGCTTGGAAAGTTTGTAAACTCACGTTACAATTTGAGTGACTTCTTGCAACATTTTCAGCGTTGCCTTAATCATATGCGTTTCAAAGAGAAGGAGGATGACTTCACATCAATTCATGGAGAGCCAGTGATTCAAACGGAGTTAGGGTTACCTTGTGAGCATATTGTAGTTGTGTTGGCTCATTTAGGGATTGATGAGATACCTAAATCGCTGGTACTTAAAAGGTGGAGCAAGGCTGCGAAGGGTGGTTTAGGTGGTAAAGAATTTGAAGCAAATCATTGCCTGGATTTTGGTAGGAGTGCTAGGAGGGCTGCACTACTTGGTTTGTATAATCATATTAGTGAGTTCAAGGCTGCAACCATAGAAAAATTTAATGTTGAACGTGAAAGACTTGTTGAAGATTGGAGGCATTGCTGGGCTGAAATTGGAATTGAACAGGTTTTGGGATCAGGTGGTCCCAATATAGCAAATGAAGTTCCAAGGAACCCAACACGTGCATCAACCAAAGGCAGTGGTGCTGCTTCATCATCTTCAGGTGTAAGAACAAGGAAAAAACAAAACTGTTCCATATGTAAATTACCAGGACACAACAAAGTGACATGTCCAAGTATTGATCAACATTGTTCTTCCCGTCATCATTACAATGTTGGTAGCTCATCACAAGTACATGCTGCTGAAACTGGTGCCGATGAAGGATTTGAATATTTTGACACTGATAGTGTTAATGCTCTATTCTCTGAATTCTGTTAA 1782 0.3973 MRGLNFGSKNPMDGNETESVQRGSCPFVMEDDDGGVFVVDENWVNSCAVEGEDHIGNSHSSENNGEFGDGFFCNDENGGVYLVGVDWNEEDEEGDGENCGEEKILIDTNDDILKMGDLSLFSPHEIEKYEFGNIDIAYKFYFEYGFANGFGIRKGRTLKNKKTLEEYQKELMCCRAGHREDRGLRLEDRVCEQKAHTMCDCKARFHIRVNKLSDRWFCICFEDEHNHDRLGAVHCSMLPVYRRMSDSDVVQMNNMMKVGIRPPNIFNTFASQSGGYEKIGFRKKDMYNKISEQRRSLSSDAKGALEYLGVASLYEKRSMWATAYLRGKIFGGFRTTSRCEGLHSELGKFVNSRYNLSDFLQHFQRCLNHMRFKEKEDDFTSIHGEPVIQTELGLPCEHIVVVLAHLGIDEIPKSLVLKRWSKAAKGGLGGKEFEANHCLDFGRSARRAALLGLYNHISEFKAATIEKFNVERERLVEDWRHCWAEIGIEQVLGSGGPNIANEVPRNPTRASTKGSGAASSSSGVRTRKKQNCSICKLPGHNKVTCPSIDQHCSSRHHYNVGSSSQVHAAETGADEGFEYFDTDSVNALFSEFC 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi577g00039 593 PANTHER OS01G0519700 PROTEIN 129 306 - -
Sebi577g00039 593 MobiDBLite consensus disorder prediction 1 21 - -
Sebi577g00039 593 MobiDBLite consensus disorder prediction 497 525 - -
Sebi577g00039 593 Pfam FAR1 DNA-binding domain 139 228 IPR004330 -
Sebi577g00039 593 MobiDBLite consensus disorder prediction 504 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi577g00039 Sebi-Chr577 597991 600463 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi577g00039 FAR1 1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi577g00039 - - tpra:123913749 195.667