Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi577g00015 | ATGCCAGCGCTTTGCGACGTTTGTAAGAGTGCCGCCGCGATTCTCTTCTGCGTTGCTGACGAGGCTGCTCTCTGCTATGCTTGCGATGATAAGGTCCATATGTGTAACAAGCTTGCTAATAAACACATTCGGGTTGGGCTTGCTGACCCCAGTGACGTTCCTCGCTGTGACATATGTGAAAATGCATCTGCTTTCTTTTACTGTAAGATAGATGGTAGTTCGTTGTGTCTACAATGTGATATGATGGCACATGTTGGTGGTAAAAGAACCCATGAAAGATATCTTCTATTGAGGCAGAGAGTTGAGTTTCCAGGTGACAAATCTGGCCGATTGGAAGAACTAGGGCTGCGACAACTGGATCAAAATGAATCACGGAAGGACAAAAGTCAGTCACTGATGCTAAAAACAAGAGATCGTCAGCAGAATGATAGGGTCTCTCCTGTTCCAATGCTAGAAAATGATGTTGAAGGTCATGGAAAAATGGATAAAAAATTAATTGATCTTAATACTAGACCACAATGGTTAAATGGACCAGACCAGCATTAA | 546 | 0.4304 | MPALCDVCKSAAAILFCVADEAALCYACDDKVHMCNKLANKHIRVGLADPSDVPRCDICENASAFFYCKIDGSSLCLQCDMMAHVGGKRTHERYLLLRQRVEFPGDKSGRLEELGLRQLDQNESRKDKSQSLMLKTRDRQQNDRVSPVPMLENDVEGHGKMDKKLIDLNTRPQWLNGPDQH | 181 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi577g00015 | 181 | ProSiteProfiles | Zinc finger B-box type profile. | 51 | 96 | IPR000315 | GO:0008270 | |
Sebi577g00015 | 181 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
Sebi577g00015 | 181 | Gene3D | Classic Zinc Finger | 2 | 95 | - | - | |
Sebi577g00015 | 181 | FunFam | B-box zinc finger protein 19 | 2 | 92 | - | - | |
Sebi577g00015 | 181 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 135 | - | - | |
Sebi577g00015 | 181 | SMART | bboxneu5 | 51 | 96 | IPR000315 | GO:0008270 | |
Sebi577g00015 | 181 | SMART | bboxneu5 | 1 | 47 | IPR000315 | GO:0008270 | |
Sebi577g00015 | 181 | MobiDBLite | consensus disorder prediction | 120 | 142 | - | - | |
Sebi577g00015 | 181 | CDD | Bbox1_BBX-like | 4 | 47 | - | - | |
Sebi577g00015 | 181 | MobiDBLite | consensus disorder prediction | 120 | 181 | - | - | |
Sebi577g00015 | 181 | Pfam | B-box zinc finger | 52 | 92 | IPR000315 | GO:0008270 | |
Sebi577g00015 | 181 | Pfam | B-box zinc finger | 4 | 42 | IPR000315 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi577g00015 | Sebi-Chr577 | 250434 | 252262 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi577g00015 | 1 | 181 | C2C2-CO-like Transcription Factor Family | AT2G21320 | 55.801 | 3.19e-68 | 204 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | DBB | Sebi577g00015 | zf-B_box | 3.7e-06 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi577g00015 | - | - | gmx:100527369 | 295.049 |