Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi575g00001 ACCAAAATGGTAGCTATGTGCCCCTTCACCCTAGTTTTCATTTTCCTTTGCAGCACAGGAGGTCTAGCAGGTGGAGCTATTGCTGGAATATCTATAGGAGTAATAGCAGGGGTTTTATTATTGGCATTTTGTGTGTATATTAAGTATCACCAAAAGAAGAAGGCACAATTGAAAAATTTGACCTTGGATAATTCCACGGTGAACTCTGCTGGAGTTAGTAAAGGCACTACGGTGGAAGAATCACGAGAGTTTTCATACAAAGAACTGGCCAATGCCACAAATAACTTCAGTATGGCTAATAAAATTGGTCAAGGTGGTTTTGGGGTAGTCTACTATGCAGAGCTGAGAGGGGAGAAAGCTGCCATCAAGAAGATGAATATGAAAGCAAAGACAGAATTTCTTGCTGAACTGAAAGTCTTAACTCATGTTCATCACTTAAACCTGGTTGCAGATTTTGGATTGACCAAGCTGGCTGAAGTTGGAAATTCAACCACTTCAGCAAAGGGTACATTCGGTTACATGCCACCAGAATATGTGTCAGGCAGGGTTTCTCCTTCTCCCAAGATAGATGTCTATGCCTTTGGAGTTGTTCTTTATGAACTTATTTCTGCTAAAGAAGCTGTAATCCAAGTTGGTGCTGAAACAAAAGGCCTTGTAGCTTTGTTTAGTGAAGTTTTTGGTCATCAACCAGACCCTATGGAAGGTCTTAAAAATCTGGTGGATCCTAGGCTTGGAGATAACTACCCAATTGATTCAGTTCACAAGATGGCACAACTTGCCAAAGCGTGCACCGAGGGTGATCCACAACGACGTCCAAGTATGAGATCTGTTGTGGTTGCTCTTATGACACTTACTTCAAATACTGAGGATTGGAATATTGCATCCTTCTATGAAAATCCATCCCTTGTAAATCTAATGTCTGGAAGATAG 930 0.4118 TKMVAMCPFTLVFIFLCSTGGLAGGAIAGISIGVIAGVLLLAFCVYIKYHQKKKAQLKNLTLDNSTVNSAGVSKGTTVEESREFSYKELANATNNFSMANKIGQGGFGVVYYAELRGEKAAIKKMNMKAKTEFLAELKVLTHVHHLNLVADFGLTKLAEVGNSTTSAKGTFGYMPPEYVSGRVSPSPKIDVYAFGVVLYELISAKEAVIQVGAETKGLVALFSEVFGHQPDPMEGLKNLVDPRLGDNYPIDSVHKMAQLAKACTEGDPQRRPSMRSVVVALMTLTSNTEDWNIASFYENPSLVNLMSGR 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi575g00001 309 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 149 294 IPR044812 GO:0019199|GO:0045087
Sebi575g00001 309 SUPERFAMILY Protein kinase-like (PK-like) 74 278 IPR011009 -
Sebi575g00001 309 Gene3D Transferase(Phosphotransferase) domain 1 151 300 - -
Sebi575g00001 309 FunFam PTI1-like tyrosine-protein kinase 3 136 295 - -
Sebi575g00001 309 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Sebi575g00001 309 Gene3D Transferase(Phosphotransferase) domain 1 74 150 - -
Sebi575g00001 309 Pfam Protein kinase domain 149 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi575g00001 309 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi575g00001 Sebi-Chr575 5417 9167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi575g00001 149 309 Receptor kinase-like Gene Family AT3G21630 60.000 1.73e-53 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sebi575g00001 Pkinase 1.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi575g00001 - K13429 tpra:123920649 239.965