Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi574g00019 ATGGGAGTTCCAGACAAAGACCCTCTTTCCCAATTGAGTTTACCTCCTGGATTTCGGTTTTACCCCACCGACGAGGAGCTCCTCGTTCAGTATCTATGCCGTAAGGTTGCTGGCCACCATTTCTCTCTTCCAATCATTGCTGAAATCGACTTGTACAAGTTCGACCCCTGGGTTCTTCCAAGCAAAGCAATTTTCGGGGAGAAAGAATGGTACTTTTTCAGCCCTAGAGACAGGAAGTACCCAAACGGGTCTCGACCCAACAGAGTAGCCGGGTCTGGGTACTGGAAAGCCACAGGAACCGATAAGATCATCACCACTGAAGGTAGAAAAGTTGGTATAAAAAAAGCCCTTGTTTTCTATGTTGGCAAAGCTCCTAAAGGCACCAAAACTAATTGGATTATGCATGAGTATCGCCTTCTAGACTCTTCGCGAAAGAACACTGGCACCAAGTTGGATGACTGGGTTTTGTGCCGGATATACAAGAAGAACTCAAGCGCACAAAAAGCTGCATCAAACGGCGGCGTTTCGAGCAAAGAGTACACTCAATACAGCAACGGTTCGTCTTCCTCGTCGTCGTCCCACCTCGACGACGTTCTGGAATCGTTGCCTGAGATTGACGACCGGTGCTTCATGCTGCCACGTGTCAATTCGCTGAGAACGCTGCAGCAGCGGGAGGAGGAGAAGCTCAATCTTCAGAACCTCGGTGCAGGGAGTTTGATGGATTGGGCTAACCCAGCGGTTCTGAACACGGTTTCGGAGTTCGGTTCGGGGAACCAAGTGGTTCAGGGGCAAGCTCAGGGGATGGTGAATTTCGGTGGCTGTAATGACCTTTATGTCCCTTCGGTTCCTTCGCTGTGCCACGTGGACTCGTCAGAGAAGATGGGGAAACCGGTGGAGGAAGAGGTTCAGAGCGGAGTCAGAACCCAACGGGTCGAGAATTCCGGGTTTTTCCAGCGCGGTCCGAATGATTTCACGCAGGGATTCTCAAATTCGGTGGACCCGTATGGGTTCAGGTACCCGGTTCAGACGGTTGGGTTTGGGTTCGGGCAATGA 1053 0.5119 MGVPDKDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKNTGTKLDDWVLCRIYKKNSSAQKAASNGGVSSKEYTQYSNGSSSSSSSHLDDVLESLPEIDDRCFMLPRVNSLRTLQQREEEKLNLQNLGAGSLMDWANPAVLNTVSEFGSGNQVVQGQAQGMVNFGGCNDLYVPSVPSLCHVDSSEKMGKPVEEEVQSGVRTQRVENSGFFQRGPNDFTQGFSNSVDPYGFRYPVQTVGFGFGQ 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi574g00019 350 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Sebi574g00019 350 SUPERFAMILY NAC domain 10 162 IPR036093 GO:0003677|GO:0006355
Sebi574g00019 350 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 197 - -
Sebi574g00019 350 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Sebi574g00019 350 FunFam NAC domain-containing protein 72-like 23 167 - -
Sebi574g00019 350 MobiDBLite consensus disorder prediction 168 195 - -
Sebi574g00019 350 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi574g00019 Sebi-Chr574 563570 564825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi574g00019 1 277 NAC Transcription Factor Family AT3G15500 63.103 6.56e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi574g00019 NAM 6.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi574g00019 - - gmx:100170718 568.155