Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi572g00004 ATGGAACAGTGGGGTGTTCATCGTCAAGCAATGTTCATTGGCCAGCATGAGGAAGATGGGAGTCAACTTCCTTCTGATATTTATAAGGAAGAGGACTCAAATGATGAAGAAGAGATAAATATTAAAACTGAACCTGTCTTTCTTCCGGAAATTAAGAAAAGGAAGCGCCTTAGCCTTAGTCAGCTTAGAGAGGTGAAAGAGGAGTCATGTGGGAGGCAAAGCAGTAGCAAGCAAAAGACAAAGAAGCATGAAAGTAGGGACAGGTGGTCAGCTGAGAGGTATAAGTTGGCTGAGAAAAACATGTGGGAGGTGTTAAAGGCAGAAGGTGCGACTTTTGAGAACCCAATAACCCGACCTGCACTAAGATTGGCTGCTCGTAAACACATCGGTGATACTGGACTTTTAGACCACTTACTAAAACACATTGATGGTAAAGTGGCACCTGGAGGGACTGAGAGGTTCCGAAGATGGTTCAACACCAATGGAATCATGGAGTATTGGTTGGAGAGTGCTGAATTGGACAAGGTCCGCCAGGACGCAGGGGTGCAGGACCCTTACTGGATACCACCATCTACTTTTAGGGCAGGCAGTGCCTCCTGTCAGAACACTGATTCTTCTGGTGAATTGAAACTGCTTAAAATAGAAATGGCCAAAATGAAGAAAGATATGCAGGAGCTCATTGCCAAGAACCAACAGAAAAGTGAAATTAGTATGATGGAGGAGAGTCACAAGGAATTTGTGAAATGGAAAGCTATGACTGACCACCACCTAACTGAAATCATGACTTCATTGAAGGGTGTGCAGGGAAAGTATGGTGAATTGGTGATCTGGAAAACTAAAGTTGAGCAACAGCTTGTGGAAATAACAAATAAATTGAATGATCTCCAAGCATCAAGGGAATGCACCACTTTCAGTCCTCCTTCAGAAAGATGGAAAGATTGGATAGAAGGTACTAACCTAGAAAATATTCAAGAGGATGCATTTGCAACTTGGATCGGGAGTTCAGAACTACTTAATGTCCCACAAGAGGTTGTACTTGAAGTTCCCAACACAGCCATACCAACCCAGCCACTCAATGAAGAACTGACAAATAAGAAGAGTGATGTGCTGGAGTTGGTGCCGATAAGGCAAGAAGATCAACCTAATGTAACCCCTGATTCTTCTACAACTGTTAATTCGAAGTCAGACCTTGACAACTCATTGATGATGTTTCAGGAAATGTTTATGGATTTATTCAAATGGAAAGAAAGAATTGAGCAGCAGCTATTGGAGGTATCAAACACTGTATATGGTATGCTGGCAATGAAGTAG 1311 0.4256 MEQWGVHRQAMFIGQHEEDGSQLPSDIYKEEDSNDEEEINIKTEPVFLPEIKKRKRLSLSQLREVKEESCGRQSSSKQKTKKHESRDRWSAERYKLAEKNMWEVLKAEGATFENPITRPALRLAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTNGIMEYWLESAELDKVRQDAGVQDPYWIPPSTFRAGSASCQNTDSSGELKLLKIEMAKMKKDMQELIAKNQQKSEISMMEESHKEFVKWKAMTDHHLTEIMTSLKGVQGKYGELVIWKTKVEQQLVEITNKLNDLQASRECTTFSPPSERWKDWIEGTNLENIQEDAFATWIGSSELLNVPQEVVLEVPNTAIPTQPLNEELTNKKSDVLELVPIRQEDQPNVTPDSSTTVNSKSDLDNSLMMFQEMFMDLFKWKERIEQQLLEVSNTVYGMLAMK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi572g00004 436 MobiDBLite consensus disorder prediction 62 88 - -
Sebi572g00004 436 Coils Coil 278 298 - -
Sebi572g00004 436 MobiDBLite consensus disorder prediction 1 42 - -
Sebi572g00004 436 Coils Coil 209 236 - -
Sebi572g00004 436 PANTHER PROTEIN DYAD 1 434 IPR044221 GO:0007131|GO:0051177|GO:0051321
Sebi572g00004 436 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi572g00004 Sebi-Chr572 54682 56619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi572g00004 88 169 PHD Transcription Factor Family AT5G22260 40.964 4.33e-06 47.4